Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2679 ATGGCACATACTAGTGGCAATGCTTTGGTGCAGTGGCTAGTAGCATCATTGCTCATTGCCATGTTGGGTGGTGCCAAAGCTTATGTTTTATGTGACATAGAGTCAAATAAGCTAAGCTTATGCTATGCAGCAGTTACTGGGAGCCACCCTAAAAAACCCAATGAAAAATGCTGTGAAATTGTTCAACATGCCAATTTGCCTTGCCTTTGCAGATACAAGTCTATCCTACCTGCACTTGGAATCAACCCCACCAATGCTTTTGCCTTGCCCAGTAAATGTGGTCTGAAAACACCACCTAAATGTAAAGTGATTTGA 315 0.4254 MAHTSGNALVQWLVASLLIAMLGGAKAYVLCDIESNKLSLCYAAVTGSHPKKPNEKCCEIVQHANLPCLCRYKSILPALGINPTNAFALPSKCGLKTPPKCKVI* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2679 104 Pfam Probable lipid transfer 25 100 IPR016140 -
Gso8g2679 104 Gene3D - 28 101 IPR036312 -
Gso8g2679 104 CDD nsLTP_like 31 100 IPR044741 -
Gso8g2679 104 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Gso8g2679 104 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Gso8g2679 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 101 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2679 Gso-Chr8 44460632 44461406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2679 1 100 Acyl Lipid Metabolism Gene Families AT5G55410 34.951 1.80e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2679 - - gmx:100812796 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2679 8 44460632 44461406 Gso8g2679 8 44460632 44461406 ECH
Gso18g0719 18 8329247 8330152 Gso8g2679 8 44460632 44461406 GST