Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2622 ATGGCATCGTTTTGTGCTGCAAGGACTTTCAACATTCCGGCGATGAACGCCGGCGTTCTTCGCCGCCGGGCATCGTGGGCCGCCGGAATAGTCGGAGCCTCGGTGGCCGGCGCTGCACTTTTGCGCTCTTGTTCGTCTAAGCGCTCTGCGCCATTCGCTTGCATGAGCCTCTCTACTGATACCGGTTTAAAGGAAGCTGTTCAAACTGAAAAGGCCCCAGCGGCATTGGGGCCATACTCTCAAGCAATCAAAGCCAACAACCTTCTGTTTGTGTCAGGTGTTCTTGGCCTTATTCCTGAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCTCCCCCGGCTCGGTCAACCTATCAAGTAGCTGGCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCCGCACTTTGA 564 0.4965 MASFCAARTFNIPAMNAGVLRRRASWAAGIVGASVAGAALLRSCSSKRSAPFACMSLSTDTGLKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLIPETGKFISDNVEDQTEQVLKNMGEILKSGGASYSSVVKTTILLADLKDFKKVNEIYAKYFPSPPPARSTYQVAGLPMDAKIEIECIAAL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2622 187 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 64 186 IPR006056 -
Gso8g2622 187 PANTHER BNAA05G36080D PROTEIN 8 187 - -
Gso8g2622 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 8 187 IPR006175 -
Gso8g2622 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Gso8g2622 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
Gso8g2622 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Gso8g2622 187 SUPERFAMILY YjgF-like 63 187 IPR035959 -
Gso8g2622 187 Gene3D - 60 186 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2622 Gso-Chr8 43880103 43883099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2622 K09022 - gmx:100785544 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2622 8 43880103 43883099 Gso8g2622 8 43880103 43883099 ECH