Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2610 ATGCTGATGATAATAGATTCTCCTGAACTTGAAGTACATTGTTGTCGTGCTGCTGATCCAACGTTTGCAGAGGTTTCTGTTGTGTTCACAGTTCACACACAAATGGAACTGAAACTACTTCTAATAACGGTTTTAATGATGGTGTCACTTTCTGCAACTGCAGCAGCTGATTACATTCGACCTCAGCCTCGAAAAACCTTCCATCTCCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGAACAGCACATGAGAGTTACCTGGATTACTGATGATAACTCTGCACCTTCAATTGTAGAATATGGAACATCACCAGGGCGATATGACTCTGTAGCTGAAGGAGAAACCACCTCTTACAGTTATCTGTTGTATAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACTATTACCGATGTGGTGGACAAGGTCCTCAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCCGTGGCTGGTGATTTGGGTCAAACCGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCACCTGCTTCCGGGAGACCTTTCATATGCTGATTATATCCAGCATCGCTGGGACTCGTTTGGTAGGCTAGTGCAGCCACTTGCTAGTGCTAGACCATGGATGGTAACACAAGGAAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTTTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGCGGATCAAATTCAAATCTCTATTATTCGTTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATGGATGGCTAAAGGAAGATCTGTCAAAGGTGGATAGGGAAAGGACACCTTGGTTGATTGTGTTATTTCATGTACCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGGCATCTATGGAGCCATTGCTTTATGCTGCTAGCGCCGATTTAGTTCTTGCCGGTCATGTGCATGCTTATGAACGCTCAAAACGTGTATACAATAAAAGACTTGATCCTTGTGGTTCAGTCCATATAACCATCGGTGATGGAGGAAACAAAGAAGGTTTAGCTCCTAAGTATATAAATCCACAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTACAGATTGTAAACTCTACGCATGCTTTCTGGAGTTGGCACAGGAATGATGATGATGAGCCAGTAAAATCCGATGATATCTGGATAACATCTTTGACCTGCTCAGGATGTGTTGATCAGAAGAGAAATGAACTCAGGAATAAACTTATGACACCTTAA 1410 0.4213 MLMIIDSPELEVHCCRAADPTFAEVSVVFTVHTQMELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRVTWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYRCGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLYYSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQGEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGLAPKYINPQPIWSEFREASFGHGELQIVNSTHAFWSWHRNDDDEPVKSDDIWITSLTCSGCVDQKRNELRNKLMTP* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2610 469 SUPERFAMILY Purple acid phosphatase, N-terminal domain 67 168 IPR008963 GO:0003993|GO:0046872
Gso8g2610 469 Gene3D - 170 457 IPR029052 -
Gso8g2610 469 CDD MPP_PAPs 172 448 IPR041792 -
Gso8g2610 469 Pfam Calcineurin-like phosphoesterase 174 364 IPR004843 GO:0016787
Gso8g2610 469 PANTHER PURPLE ACID PHOSPHATASE 18 38 460 - -
Gso8g2610 469 SUPERFAMILY Metallo-dependent phosphatases 172 439 IPR029052 -
Gso8g2610 469 Pfam Iron/zinc purple acid phosphatase-like protein C 381 436 IPR025733 -
Gso8g2610 469 Gene3D - 78 169 - -
Gso8g2610 469 Pfam Purple acid Phosphatase, N-terminal domain 79 159 IPR015914 GO:0003993|GO:0046872
Gso8g2610 469 PANTHER ACID PHOSPHATASE RELATED 38 460 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2610 Gso-Chr8 43741335 43745557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2610 79 459 Miscellaneous Gene Families AT1G13900 25.877 1.13e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2610 K22390 - gmx:100782338 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2610 8 43741335 43745557 Gso8g2610 8 43741335 43745557 ECH
Gso8g2610 8 43741335 43745557 Gso14g0208 14 1833312 1836245 PCT
Gso8g2610 8 43741335 43745557 Gso2g2460 2 49113333 49116290 PCT
Gso14g0208 14 1833312 1836245 Gso8g2610 8 43741335 43745557 PCT
Gso2g2460 2 49113333 49116290 Gso8g2610 8 43741335 43745557 PCT