Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2593 ATGGAAAACAACACTGACAAGTTATCCTCCTTGCCTGAACTTTTGTGTCTGTTCATCATTTCCTTGCTTCCATTCAAGGATGCCGTGAGGACGTGCATTCTGTCCAAATATTGGTTGCACATATGGAAAAATTCACCAAAAATAGAGTTTAGTGAAAATTTTGATGGAAATTTTATCGGTCGTTTTGAACCCTTCAGTTCCATTAAAGCTCGAAGAAGTGTTTTTATGAAATTCTTAAAACTTTGGCTTGATTTCCGAAAAGAAGGTGACGTGGAAAAGTTTTCTTTGAAGTTCTCAAAGCCTAAAAATGATCATCGTGAAATCATAGAAGGGTGCATCGCCTTTGTCACCCAACATGGGGTGAAGGAGTTGGAGCTAGATTTCTCTGACCCCTTTTGGGAGGAGGAAGTGATTCCAAACAAACGTGAGGCTTTGTTTGAATTGCCAAAACTTGCGTATGAGAACAAACCCAACATTGAATCACTGAAACTCTCTTCATGTAGTTTTCGTGAAAATGATTTGAGTAATTGGCAGGCACTTAAAGAGGTTACTTTCGGTTGGATGGAAGTGACACTCGATGCCATGACAATTGTGTTATCCAATTGTAAAATGATCGAGAGTTTAGTTTTGAACAAGTGTTGGAACTTGAGTCATTTTGAAATTGGCAGTGAAGCCTTGAGTCTAAAGAGGCTTGTTGTTGACAAGTGTTCTTTTCGAAATGCTTTGTTCAAAGTCAGTGCCCCAAATTTATGCTTTTTCAAGTATTTTGGGAAACTGTGTTTTTTTGAAATGAAAAATACCTTAGCCATCGAAGAGGCACACCTTCATTTCTACCTTGGTTATGACAATGTTGGAACCGGTGCTAGGGTTCTGTATGACCTGGTGAAAGATCTCTACAATGCTAGGGTTCTGACTGTGTGCCCTTATCTAATTCAGGTTATTTGTACGGGAGAAAAGATACGTATGGAACGTGACATGAATGCAAGACATTTGATACTGAGAATGAACATGCTCCGCTGTGAACTTCGTGCAGTCTCATTCTTTCTCCTCAGCTGCCCAATGTTAGAATGCCTCACATTTGAATTAGGCTCAGAGATTATTTTACCAGATTATCAAGCAATGTGGATAGACAGCGATGAAGAACAAGATGATCTACCACTTTGGATTGACAGTGACGAAGACCAGGATGATCAAGCAATGTGGATGGACAATGATTTTCAGAATTATGATGACGACGATGAATATAACATAGACGATGAAGATAACATATATGATGATTACTGCACAGATTTTATCAACATGGTTGATAATCAAATCAAGGGGATGAAAAATGTAATCAACTATAATTGTTTGGAATCATCTCTAAAGCTAGTGGAGGTGAAGGATTTTGTAGGGTCCAAGAACGGGCTTGTTTTTCTATGCTATCTTATCCGTTATGGGAAGGTCTTGAAAAATGTTAGCATCAACGTGTTAAAGACAGAGCTTGAAGGTAGTAGCAATGTGGCATTTTACAGTGCAATAGAAGAATACTTGATGACCACTCCTAGGGCTTCAAGTGATTTGCAGATATCAATGTGTTATTGA 1584 0.3857 MENNTDKLSSLPELLCLFIISLLPFKDAVRTCILSKYWLHIWKNSPKIEFSENFDGNFIGRFEPFSSIKARRSVFMKFLKLWLDFRKEGDVEKFSLKFSKPKNDHREIIEGCIAFVTQHGVKELELDFSDPFWEEEVIPNKREALFELPKLAYENKPNIESLKLSSCSFRENDLSNWQALKEVTFGWMEVTLDAMTIVLSNCKMIESLVLNKCWNLSHFEIGSEALSLKRLVVDKCSFRNALFKVSAPNLCFFKYFGKLCFFEMKNTLAIEEAHLHFYLGYDNVGTGARVLYDLVKDLYNARVLTVCPYLIQVICTGEKIRMERDMNARHLILRMNMLRCELRAVSFFLLSCPMLECLTFELGSEIILPDYQAMWIDSDEEQDDLPLWIDSDEDQDDQAMWMDNDFQNYDDDDEYNIDDEDNIYDDYCTDFINMVDNQIKGMKNVINYNCLESSLKLVEVKDFVGSKNGLVFLCYLIRYGKVLKNVSINVLKTELEGSSNVAFYSAIEEYLMTTPRASSDLQISMCY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2593 527 Pfam FBD 450 488 IPR006566 -
Gso8g2593 527 SUPERFAMILY RNI-like 147 250 - -
Gso8g2593 527 PANTHER F-BOX PROTEIN-LIKE 1 477 - -
Gso8g2593 527 SMART 9598neu4hmm 449 526 IPR006566 -
Gso8g2593 527 SUPERFAMILY F-box domain 5 48 IPR036047 GO:0005515
Gso8g2593 527 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2593 Gso-Chr8 43538044 43541598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2593 - - gmx:102660850 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2593 8 43538044 43541598 Gso8g2593 8 43538044 43541598 ECH