Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1910 ATGGATTTCAGGCAAAGAGCTCCAACTTTCCGTCCACAACTTTCTGTTCGTCGCGTGTACGAGACTTTGGAGCCACGATCGGAGACAAAAGAACTTCCAGAAGCTTATCTTCTGCGTGTTTATATTCCTGGTTTTCCAAGGGAGAATGTAAAGATTACATATGTGGCCTCTTCAAGAACGGTGAGGATTACAGGAGAAAGGCAACTTCAAGGTAACAGATGGCACAAAATTGACAAATCATATCCCATTCCTGATTATTGTGAGGCAGAGGCACTTCAAGGTAAGTTTGAGATTCCAATTCTCACCATTACAATGCCAAAAAAGGCCACTTCACAAGCTGCTACTAAACAACAAGAAGTGGGAACATCCCAAGAGAAAGGTGCAGTAGTAGCTGAACCAAAGCCTCAAGAAAAAGTCCAAGAGACCACTTCAGCACCACAACCTACAACAACTACTAAAGTGGAAGAACCAATTGAAGAGAAGAAAAGTGCATCACCAACAAGCCCTGATTTAAAGGCACAACAAAAAAATGATACTTTTGAAGACACACCATCTCAAAGCCTTTCAAAACCAATTAAGGATCAAAAGGGTCAAGAGGAATTGGTGCCAAAACCCACACCAACACCAACACCAACACCAAGGGCAACTACAATGCAAACATATGAAAAGGCTCAAAAGGGTCAAGAGGAAGAGGAGGTTGAGTCAAAGTCAACACCAACAATGCTAACCAAGGCCAAAACAGCTGAAAGACCACAAAAGGGTGAAGAGGAATTTGAAGCAAAGCGAACACCAACAATGCTGACCAAAGTCAAAACAGCTGAAAGACCCCAAAAGGGTGAAGAGGAATTTGAAGCAAAATCAACACCAGCAATGTTGACCAAAGCCAAAACAGCTGAAAGGCCACAAAAGGGTGAAGAGGAATTTGAAGCAAAACAAACACCAACAATGCTGACCAAAGTCAAAACTGCTGAAAGACCCCACAAGGGTGTAGAGGAAGAAGAGTCAAGACCTTCAATAACAAATGTTACAAGGAAGCCATCAGTTAAGGAGCAATTGGAGGAAAAGAAGACAGAGGAAACAAGTGCTGAAGATGCAAAGAAGGAAAGGATCTCAAATAAGGAAGTTAAAGAGGAATCTTCTGAGTCAAGAAAGCCTATGAAAGATAAGGAGGAGGGTGATTTTGAAGAGAAAGAAACCAAGGCAGAAAAATTGTTAGCCAAGGAAGCAGAAACTTCTGCCCCAAAAGTTCAGAAGAAAAAGGAAAAGCAATCCAGCAACAGAACTAATTCCAAAAGGAAAGGGAAGAGTGAAGACAATGCAATGGAAAAGGTTGGTCCTGTCTCCCAGGTTTTCACCAAAATAGCAGAAGGGATATGGAATGAGGAAGAGAAAAAATTAGTTGGAAATATTGGTGCTGCAGTTTTGGTCATTGCTGCATTGGGATATTATGTATCTTATAGGTTTGCCTCTTGA 1473 0.4155 MDFRQRAPTFRPQLSVRRVYETLEPRSETKELPEAYLLRVYIPGFPRENVKITYVASSRTVRITGERQLQGNRWHKIDKSYPIPDYCEAEALQGKFEIPILTITMPKKATSQAATKQQEVGTSQEKGAVVAEPKPQEKVQETTSAPQPTTTTKVEEPIEEKKSASPTSPDLKAQQKNDTFEDTPSQSLSKPIKDQKGQEELVPKPTPTPTPTPRATTMQTYEKAQKGQEEEEVESKSTPTMLTKAKTAERPQKGEEEFEAKRTPTMLTKVKTAERPQKGEEEFEAKSTPAMLTKAKTAERPQKGEEEFEAKQTPTMLTKVKTAERPHKGVEEEESRPSITNVTRKPSVKEQLEEKKTEETSAEDAKKERISNKEVKEESSESRKPMKDKEEGDFEEKETKAEKLLAKEAETSAPKVQKKKEKQSSNRTNSKRKGKSEDNAMEKVGPVSQVFTKIAEGIWNEEEKKLVGNIGAAVLVIAALGYYVSYRFAS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1910 490 MobiDBLite consensus disorder prediction 298 312 - -
Gso8g1910 490 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 269 490 - -
Gso8g1910 490 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 5 266 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 167 192 - -
Gso8g1910 490 Coils Coil 387 407 - -
Gso8g1910 490 PANTHER HEAT SHOCK PROTEIN 26 269 490 IPR045045 -
Gso8g1910 490 PANTHER HEAT SHOCK PROTEIN 26 5 266 IPR045045 -
Gso8g1910 490 Coils Coil 348 369 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 114 444 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 347 440 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 321 339 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 248 264 - -
Gso8g1910 490 MobiDBLite consensus disorder prediction 273 287 - -
Gso8g1910 490 Pfam Hsp20/alpha crystallin family 29 115 IPR002068 -
Gso8g1910 490 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 123 IPR002068 -
Gso8g1910 490 SUPERFAMILY HSP20-like chaperones 9 114 IPR008978 -
Gso8g1910 490 MobiDBLite consensus disorder prediction 137 153 - -
Gso8g1910 490 Gene3D - 1 120 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1910 Gso-Chr8 18898086 18900937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1910 - - gmx:100794510 894.804