Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1887 ATGATGAACGCCGCAACAGCAGCTAATAGCAGTGTTTATTCACAGACACAGTGCAGACTACTTTCCTCGGATCTTCGAAGTTCGATTCCTTTCTTGAATGAACGCAAGTCACGGTTGGTGGTAAGGGCTGGTGGTCGTCCTCCTCAAAATATGGGCAAGGACGATGATGAGAAGCAGCAGCAGCGTGTCACACAACAACAACAACAACAACAACAAGAACAACAAGCACCTCCGCCCGTGTCTCTTAGCCTGGACGACGTGAACCCCGTAGGACTGGGTCGAAGATCGCGGCAGTTGTTCGATGAGGTTTGGAGAAAGTTCTCGGGATTGGGTCAGATTTCTAGGACAATACGGTCGGATGATCAGGAGGCTCTGGATGCCCTTCTGGTCCGAGAAGGTCCGATGTGCGAGTTCGCAATCCCTGGCGCTCAGAATACTACTGTACTCGTTGTTGGTGCCACCAGCCGCATCGGTCGCATCGTTGTGAGAAAGCTCATGCTCAGGGGCTACGCTGTCAAGGCTCTGGTAAGGAGGGCAGACCAGGAGGTGCTTGAGCTCCTTCCAAGGTCTGTAGAGATAGTCATTGGGGATGTTGGTGATCCCGCCACTGTCAAGGCTGCTGTTGAAGGTTGCAACAAAATTATATATTGTGCCACTGCTCGCTCTGCTATAACTGGGGATCTCTTCCGCGTTGATCATCGAGGCGTTTATAATCTTACTAAAGCATTTCAGGATCACAGTAACAAATTGGCACAATCACGGGCTGGGAAAAGCAGCAAAAGTAAGCTCTCGATTGCCAAATTCAAATCTGCATCGTCACTCAATGGATGGGAAGTTCGTCAAGGAACTTACTTCCAAGATGTAGTTGCCACAAAATACGATGGTGGGATGGATGCTAAATTTGATTTCACTGAGACTGGAGATGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGAGGCTATGTGGAACTATCCAAAAAGCTTTCTCTGCCACTAGGTTATACTCTTGATAGGTACGAGGGTCTGGTTCTTTCTGTCGGTGGCAATGGAAGATCTTATGTATTAATTCTAGAAGCTGGTCCTTCGGCAGATCCAAGTCAGAGTAGATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTACCATTTTCATCATTCCGCCCAGTGAAACCAGATGATCCAGTGTTAGATCCTTTTCTTGTGCATACTTTGACCATACGCTTTGAGCCTAGAAGACAGAGGCCTGTTGAAGGAAATGCAACAATGAAACAGGATTTAAGAAGCTTTAAGCTTATATTGGAATATATTAAAGCCTTGCCTACTGGGCAAGAAACCGATTTTGTATTAGTTTCATGTTCTGGACTAGGAATTGAGCCTTCCAGGCGGGAGCAGGTTCTTAAAGCCAAGAGGGCTGGTGAAGATTCCTTAAGAAGATCTGGCCTTGGATACACAATAGTCCGTCCTGGTCCATTGCAGGAAGAACCTGGAGGGCAGCGTGCTCTAATATTTGATCAAGGAAACAGAATATCACAGGGCATCAGCTGTGCTGATGTAGCTGATATATGTGTGAAGGCACTACATGATACAACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTATATTGCTGAGGATGGAAGGGAGCTTTATGAGCTGGTTGCACACTTGCCCGACAAAGCAAATAACTACTTGACACCAGCACTCTCTGTCTTAGAGAAGAATACCTGA 1746 0.4616 MMNAATAANSSVYSQTQCRLLSSDLRSSIPFLNERKSRLVVRAGGRPPQNMGKDDDEKQQQRVTQQQQQQQQEQQAPPPVSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRSDDQEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYAVKALVRRADQEVLELLPRSVEIVIGDVGDPATVKAAVEGCNKIIYCATARSAITGDLFRVDHRGVYNLTKAFQDHSNKLAQSRAGKSSKSKLSIAKFKSASSLNGWEVRQGTYFQDVVATKYDGGMDAKFDFTETGDAVFSGYVFNRGGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLILEAGPSADPSQSRLYFARISTKVGFCRVRVPFSSFRPVKPDDPVLDPFLVHTLTIRFEPRRQRPVEGNATMKQDLRSFKLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGNRISQGISCADVADICVKALHDTTARNKSFDVCYEYIAEDGRELYELVAHLPDKANNYLTPALSVLEKNT* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1887 581 Gene3D - 143 275 - -
Gso8g1887 581 Gene3D - 403 557 - -
Gso8g1887 581 PANTHER EPIMERASE-RELATED 49 580 - -
Gso8g1887 581 Pfam Complex I intermediate-associated protein 30 (CIA30) 295 395 IPR013857 -
Gso8g1887 581 PANTHER HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 49 580 - -
Gso8g1887 581 SUPERFAMILY Galactose-binding domain-like 265 404 IPR008979 -
Gso8g1887 581 MobiDBLite consensus disorder prediction 39 87 - -
Gso8g1887 581 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 145 560 IPR036291 -
Gso8g1887 581 MobiDBLite consensus disorder prediction 62 81 - -
Gso8g1887 581 Pfam NAD(P)H-binding 468 533 IPR016040 -
Gso8g1887 581 Pfam NAD(P)H-binding 152 246 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1887 Gso-Chr8 18474622 18486979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1887 - - gmx:100779812 1112.44