Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1886 ATGACGGGGGCTGAAGGCCCAACCTACACAGTAGATGATGCTCTTGTGGCTTTGGGTTTTGGAAATTTCCAAATTCTCGTGCTTGCTTATGCTGGTGTAGGTTGGGTTTCAGAAGCAATGGAAATGATGCTACTCTCTTTTGTAGGCCCTGCAGTTCAAACTGCATGGAATCTTTCCGCTCATGAAGAGAGTTTGATAACCAGTGTGGTTTTTGCTGGCATGCTAATTGGTGCATACTCATGGGGCATTGTTTCAGATAAACATGGAAGGAGGAAAGGATTCCTTATCACAGCGACAGTTACTGCTTTGGCTGGTTTTCTTAGTGCATTTGCTCCTAACTATATATTTTTAATTGTCCTCCGTTCTCTGGTTGGGATTGGTTTGGGAGGTGGCCCTGTATTATCATCTTGGTTTCTAGAGTTTGTTCCTGCTCCCAATAGAGGTACCTGGATGGTTGTCTTTTCAGCATTTTGGACTCTTGGTACAATTTTTGAGGCCTCACTTGCATGGATTGTGATGCCAAAACTGGGTTGGAGATGGCTTCTTGCACTGTCTTCTCTTCCCACGTCTTTCCTTCTTCTGTTCTACAAAGTGACTCCTGAGTCACCAAGATACCTATGTTTGAAAGGTAGAACAGCTGATGCAATTAATGTTTTGGAGAAAATAGCAAGAGTAAATGGAAGAGAACTTCCTTCCGGTATCCTTGTTTCTGAGCATGAAATTGAGTTACACAAAATTGATAACCCTACAGAGGACGCACGCTTGCTCTCACCAAGAACAAATGAAGATGAACATCCTAAAGGAATAGTTTCCAATTTAGGTGCTATCTCATCGTTGTTAGTGCTTCTCTCACCGAAATTGGCAAGGTCAACCCTTCTATTATGGGCTGTGTTCTTTGGCAATGCTTTTTCGTATTATGGCCTTGTTTTGTTGACCACTGAGTTAAACGGACATAGTAAATGCATGTCAGATAAATTGCAGACAGAGAAGTCCCAGGATGTTAGATACAAGAGTGTTTTTATTGCTAGTTTTGCAGAGCTACCAGGGCTTCTCTTGTCAGCTGCAGCAGTAGATAAACTCGGTCGTAAACTCTCAATGTCAATCATGTTCTTCATGTGCTGTATTTTCCTTCTCCCATTATTATTCTATCTGCCTGAAGGCCTAACAACGAGCTTTTTATTTCTAGCTCGCATATGCATCACAGCAACCTTCACAATTGTGTATATATATGCACCCGAGATGTACCCAACATCAGTTAGAACAACTGGTGTGGGAATTGCAAGTTCGGTGGGCAGAATTGGTGGAATGATATGTCCTTTGGTAGCTGTGGGTTTAGTACATGGATGTCATCAAACTGCAGCTGTCCTTCTGTTTGAGATCGTATCTCTTGTTTCAGGAATATGTGTCATGTTCTTCCCAATTGAAACCATGGGCCAAGAACTGCGAAATAGTGTGCAAGTCTAA 1464 0.4228 MTGAEGPTYTVDDALVALGFGNFQILVLAYAGVGWVSEAMEMMLLSFVGPAVQTAWNLSAHEESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFLITATVTALAGFLSAFAPNYIFLIVLRSLVGIGLGGGPVLSSWFLEFVPAPNRGTWMVVFSAFWTLGTIFEASLAWIVMPKLGWRWLLALSSLPTSFLLLFYKVTPESPRYLCLKGRTADAINVLEKIARVNGRELPSGILVSEHEIELHKIDNPTEDARLLSPRTNEDEHPKGIVSNLGAISSLLVLLSPKLARSTLLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSDKLQTEKSQDVRYKSVFIASFAELPGLLLSAAAVDKLGRKLSMSIMFFMCCIFLLPLLFYLPEGLTTSFLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASSVGRIGGMICPLVAVGLVHGCHQTAAVLLFEIVSLVSGICVMFFPIETMGQELRNSVQV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1886 487 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 485 - -
Gso8g1886 487 SUPERFAMILY MFS general substrate transporter 14 481 IPR036259 -
Gso8g1886 487 Gene3D MFS general substrate transporter like domains 21 485 IPR036259 -
Gso8g1886 487 Pfam Sugar (and other) transporter 60 225 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso8g1886 487 Pfam Sugar (and other) transporter 351 482 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso8g1886 487 PANTHER BNAA01G30100D PROTEIN 6 485 - -
Gso8g1886 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 477 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1886 Gso-Chr8 18454131 18457732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1886 49 485 Organic Solute Cotransporters AT3G20660 25.835 2.07e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1886 - - gmx:100786568 927.546