Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1884 ATGAATACGATAACGACGACGACGATGACGATGAGTGTATTAAACATCTATGGCTATGGCTATGGTGTTGTAGCTGTTGTTGTGTTCCTTATATTATTGCTTTGGCAGCGTCACAGATTTTTCTTCGCTTCATCTCGGTCGTCTCCATCCACTTCATTACTGCTCTTCGATTCTATCAATTCAAACTCAAACTCCAGAAGCAGAACCTCAAATTTTGTGACAGATGCAGATTTGAAATTTTTAATGGAGATTTTGGATGAGAAGCTCGGCAGTGATAAATGGGAGGATGTTCTAGATAAAAGAAACCATCATCTAAGCTACAGTGTGAAATGCTGCAGGCCTAAGAATGGTCCCCTGAAATATTTGAGCAAGACTGTGTTCAATGACATTTCATCAGAGATGCTAAGAAACTTCTACATGGACAATGATTACAGAAAGCAGTGGGATAAAACACTGGTTGAGCATAAACAACTGCAGGCAGACAAATCTGATGGTACTGAAGTTGGTCATACAATTAAAAAGTTCCCTCTTTTAAAGCCTAGAGAATATGTGCTAGCTTGGAAGTTGTGGGAGGGGAGTGATAAAACATTTTACTGTTTTATGAAGGAATGTGAGCATCCTTTGGCACCACGACAGAGAAAATATGTACGAGTTGAGTTTTTTAGATCTGGTTGGCAAATAAGAGAAGTACCTGGTAGCAATGCCTGTGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTAAATACGGAGATGGCTAAGCTGGCCTTTCGCAAGGGCATATGGAACTATGTATGTAAGATGGATAACGCGCTTAGAAGATACTCTGTTATAGGCTATCATTTATCAAGTTCAGTTACCACTTCAATCGATTTAATGCAGAAGGTACCTGCTTGCTTGGACACTATTTCGAGTAACATCTCTCCAGCAAATCCTACCGTCTTCCATGATCAAGTTACTGATGAATCTCAAATTAGGATGATCCAAAGAAGGCCATCAAGAAAGTTGATAGCCAATGGTTTGTTGCTTCTAGGGGGTGCTACTGCTATATGCCTGTCTCGTGGTCACTCTAGCCTAGGTGCTAAAGTTGCCATGGCATACATCATAAACAAACTTAGTAAGCGTGGTGCTAGATCAAACCAAAGCAAACAAAGTTGA 1158 0.4024 MNTITTTTMTMSVLNIYGYGYGVVAVVVFLILLLWQRHRFFFASSRSSPSTSLLLFDSINSNSNSRSRTSNFVTDADLKFLMEILDEKLGSDKWEDVLDKRNHHLSYSVKCCRPKNGPLKYLSKTVFNDISSEMLRNFYMDNDYRKQWDKTLVEHKQLQADKSDGTEVGHTIKKFPLLKPREYVLAWKLWEGSDKTFYCFMKECEHPLAPRQRKYVRVEFFRSGWQIREVPGSNACEITMFHQEDAGLNTEMAKLAFRKGIWNYVCKMDNALRRYSVIGYHLSSSVTTSIDLMQKVPACLDTISSNISPANPTVFHDQVTDESQIRMIQRRPSRKLIANGLLLLGGATAICLSRGHSSLGAKVAMAYIINKLSKRGARSNQSKQS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1884 385 CDD START_STARD2_7-like 73 275 - -
Gso8g1884 385 SUPERFAMILY Bet v1-like 82 275 - -
Gso8g1884 385 Pfam START domain 125 245 IPR002913 GO:0008289
Gso8g1884 385 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 20 384 - -
Gso8g1884 385 ProSiteProfiles START domain profile. 94 277 IPR002913 GO:0008289
Gso8g1884 385 Gene3D - 67 277 IPR023393 -
Gso8g1884 385 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 20 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1884 Gso-Chr8 18409101 18423200 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1884 - - gmx:102661161 711.449