Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1882 ATGTGGAGGCTGAAGATAGCAGAAGGTGGAAATGAGGCATACATATTCAGCACAAACAATTTTGTTGGGAGGCAGACATGGGAGTTTGATCCTGAAGCAGGGACTCCAGAGGAACGAGCCCAGGTTGAAGCAGCTCGTAAGGATTTCTACCACCACCGCTTCAAGGTCAAGCCCTGTGCTGACCTCCTTTGGCGTTTTCAGATTCTGAGAGAAAATAACTTCAAACAAACAATACCTAGTGTGAAGATAGAAGATGGAGAGGAAATAACTTACCAAAAAGTCACAAGCACTGTGAGAAGGGGCGCACATCACCTTGCGGCATTGCAGACCAGTGATGGCCATTGGCCTGCTCAAATTGCAGGTCCTCTGTTTTTTCTTCCTCCTTTGGTTTTCTGTATGTATATTACAGGGCATCTTGAATCAGTTTTTCCAGAAGAACATCGCAAAGAAATTCTCCGTTACATATATTATCACCAGAATGAAGATGGAGGATGGGGACTACACATAGAGGGTCATAGCACTATGTTTTGTACAGCACTGAACTATATATGCATGCGAATTCTTGGAGAAGGACCTAATGGAGGTCATGATAATGCTTGTGCTAGAGCAAGAAATTGGATTCGAGATCATGGTGGTGTAACACATATACCTTCATGGGGGAAAACTTGGCTTTCTATACTTGGTGTATTTGATTGGTGTGGAAGCAACCCAATGCCCCCAGAGTTTTGGATCCTTCCATCGTTTCTTCCTATGCATCCGGCTAAGATGTGGTGTTATTGTCGATTGGTATACATGCCCATGTCTTATTTATATGGGAAGAGGTTTGTGGGTCCAATCACACCACTCATCTTACAATTAAGAGAAGAGCTATTCACTCAACCTTATGAAAAAGTTAATTGGAAGAAAGCACGTCACCAATGTGCAAAGGAAGATCTTTATTATCCACATCCTTTGGTACAAGATCTAATATGGGATAGTTTATACATATTTACTGAGCCATTGCTTACTCGTTGGCCTTTCAACAAGTTGATTAGAGAAAAAGCCCTTCAAGTAACAATGAAGCATATTCATTACGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAACGGAGATGCTTTCAAGAAGCATCTTGCAAGGATCCCAGATTACTTATGGGTTTCTGAAGATGGAATGACCATGCAAAGTTTTGGTAGTCAAGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTTCTTGCCACTAACCTAATTGAAGAAATTGGTCCTACACTTGCAAAAGGACATGACTTCATCAAGAAGTCTCAGGTAAAAGATAATCCTCTTGGAGATTTTAAAAGTATGTATCGTCATATTTCTAAAGGATCTTGGACATTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAAGTTTAAAGTGTTGTCTACTTCTATCAATGTTGCCACCAGAGATTGTGGGAGAAAAGATGGAACCTGAAAGGTTGTACGATTCAGTCAATGTCTTGTTGTCGCTTCAGAGTAAAAAAGGTGGTTTAGCTGCATGGGAGCTTGCAGGAGCTCAAGAGTGGTTAGAATTACTCAATCCCACAGAATTTTTTGCGGACATTGTAGTTGAACATGAATATGTTGAGTGCACTGGATCTGCAATCCAAGCTTTAGTTTTGTTCAAGAATCTATATCCAGGACATAGGAAGAAAGAGATAGAAAATTTCATTGCCAATGCAGTTCGATTCCTTGAAGATACACAAACAGCTGATGGTTCATGGTATGGAAACTGGGGAGTTTGCTTCACTTATGGCTCTTGGTTTGCACTTGGCGGTCTAGCAGCTGCTGGCAAGACTTACACCAATTGTGCTGCCATTCGCAAAGCCGTTAAATTTCTACTTTCAACACAGAGGGAAGACGGTGGATGGGGAGAGAGCTATCTTTCAAGCCCAAAAAAGATATATGTACCTCTAGAAGGAAGTCGATCAAATGTTGTACATACAGCATTGGCTCTTATGGGACTAATTCATGCTGGACAGGCGGATAGAGACCCTAAGCCTCTTCATCGAGCTGCAAAGTTGCTCATTAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAGCAGGAAATCACAGGAGTATTCATGAAAAATTGCATGTTGCATTATCCAATGTACAGAGATATTTATCCAATGTGGGCTCTAGCTGAATATCGTAGGCGGGTTCCATTGCCTTCCACTGAAGTTTAA 2289 0.4168 MWRLKIAEGGNEAYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARKDFYHHRFKVKPCADLLWRFQILRENNFKQTIPSVKIEDGEEITYQKVTSTVRRGAHHLAALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEHRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACARARNWIRDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYEKVNWKKARHQCAKEDLYYPHPLVQDLIWDSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARIPDYLWVSEDGMTMQSFGSQEWDAGFAVQAFLATNLIEEIGPTLAKGHDFIKKSQVKDNPLGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAESLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQSKKGGLAAWELAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKNLYPGHRKKEIENFIANAVRFLEDTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLSTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTALALMGLIHAGQADRDPKPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTEV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1882 762 SFLD Prenyltransferase Like 2 84 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gso8g1882 762 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gso8g1882 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 756 IPR008930 -
Gso8g1882 762 Pfam Squalene-hopene cyclase N-terminal domain 99 403 IPR032697 -
Gso8g1882 762 Gene3D - 119 414 - -
Gso8g1882 762 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Gso8g1882 762 PANTHER LUPEOL SYNTHASE 1 1 756 - -
Gso8g1882 762 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 97 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gso8g1882 762 Gene3D - 496 723 - -
Gso8g1882 762 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gso8g1882 762 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Gso8g1882 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1882 Gso-Chr8 18379635 18389250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1882 K15813 - gmx:100778398 1604.73