Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1875 ATGTCGTCTTCCAACTCCAAAACCAAAACCCCTTCTTCACTCTCACTCTGCAACTCTAAGCCTCAGCCTCAGGAAGGTAACATGGCATTGGAATCCCAACCGCAGAAGAACAAGTATGGACACGGGGTGTTTGGAGACGTCTACAGCATCATCAAAGAGATGGAGATTGATCATCATAACAACTCTACCTTTGATTTTCAATTTCCCCCAATTACAAATTTTCTTGGCTCTAGAGAGGTTCGGGAGTTTATTAGCGGGGCCCTTTCAGGGGCAATGACAAAGGCTATACTTGCTCCTCTTGAGACCATCAGGACAAGAATGGTAGTTGGTGTTGGGTCAAAAAATATTGCTGGTAGTTTCATAGAGGTTATAGAGCAGCAGGGATGGCAAGGACTGTGGGCTGGAAACATGATCAATATGCTTCGTATAGTTCCAACACAGGCCATTGAGCTAGGCACATTTGAGTGTGTCAAACGGGCTATGACATCCCTGCATGAGAAATGGGAAAGCAATGAATACCCCAAGTTGCATATAGGTCCCATCAATTTCAACTTATCTTTATCTTGGATTTCACCAGTTGCCATCGCCGGTGCAGCTGCTGGAATTGCTAGCACTCTTGTATGCCATCCCCTTGAAGTTTTGAAGGACCGGTTAACTGTAAGTCCTGAAACTTACCCTAGTTTAGGCATTGCGATTAGAAATATTTATAAAGACGGAGGTGTTGGCGCTTTTTATGCTGGTATCTCACCAACTCTGGTTGGCATGCTTCCATACAGTACATGTTTTTATTTCATGTATGATACAATAAAGGAATCTTACTGCCGGACCAAAAGTAAGAAATCTCTAAGCCGTCCAGAGATGCTTTTGATTGGAGCTCTTGCAGGTTTTACTGCCAGTACAATTAGCTTCCCCTTGGAGGTAGCAAGGAAGCGCCTGATGGTGGGTGCTTTGCAAGGTAAGTGCCCGCCAAACATGGCAGCGGCACTTTCAGAAGTTATTAGAGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCAAGCTGTTTGAAGGTCATGCCATCCTCTGGTATCACCTGGATGTTTTATGAAGCTTGGAAAGACATATTGCTTGTCCAGAATGGTAATCCCCTTTAG 1137 0.4477 MSSSNSKTKTPSSLSLCNSKPQPQEGNMALESQPQKNKYGHGVFGDVYSIIKEMEIDHHNNSTFDFQFPPITNFLGSREVREFISGALSGAMTKAILAPLETIRTRMVVGVGSKNIAGSFIEVIEQQGWQGLWAGNMINMLRIVPTQAIELGTFECVKRAMTSLHEKWESNEYPKLHIGPINFNLSLSWISPVAIAGAAAGIASTLVCHPLEVLKDRLTVSPETYPSLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCFYFMYDTIKESYCRTKSKKSLSRPEMLLIGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQNGNPL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1875 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 369 IPR018108 -
Gso8g1875 378 SUPERFAMILY Mitochondrial carrier 80 364 IPR023395 -
Gso8g1875 378 MobiDBLite consensus disorder prediction 1 37 - -
Gso8g1875 378 Gene3D Mitochondrial carrier domain 77 374 IPR023395 -
Gso8g1875 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 272 IPR018108 -
Gso8g1875 378 PANTHER SOLUTE CARRIER FAMILY 25 42 374 - -
Gso8g1875 378 Pfam Mitochondrial carrier protein 80 162 IPR018108 -
Gso8g1875 378 Pfam Mitochondrial carrier protein 194 273 IPR018108 -
Gso8g1875 378 Pfam Mitochondrial carrier protein 285 371 IPR018108 -
Gso8g1875 378 MobiDBLite consensus disorder prediction 1 34 - -
Gso8g1875 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 160 IPR018108 -
Gso8g1875 378 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 42 374 - -
Gso8g1875 378 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Gso8g1875 378 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Gso8g1875 378 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Gso8g1875 378 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Gso8g1875 378 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1875 Gso-Chr8 18321449 18323912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1875 65 378 Organic Solute Cotransporters AT3G20240 73.885 9.55e-177 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1875 - - gmx:100777341 746.888