Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1827 ATGGTGATGGCCATGGCCATTTCATCTCCTTCTTACAACCTCACTTTCCTTCTTCCTCGCTCAGGCTCACTTCAACCTCTTTCTTTAACTCCGCCATCTTGTTCTTTTTTTGCTCAACCTCTCCGAAACCTTTCACTCAAGTTCTGTGCAAAAATTCAGAGCGTTGGAGTTGGAAGAGAAGGTCCAGCTTCCGATCCCAAGGCCGGCGTCTCACTTTACAAACCTAAATCCTACGAAGTTCTCGTTAGCGATGCCGCCAATTCCCTCTCTTATGCTCTTCAAGACGGAAAACTTCGCCTCGAAATCGATTTCCCGCCTTTGCCCAGCAACATTTCTTCTTATAAGGGATCTTCAGATGAGTTCATTGATGCCAACATTCAACTTGCCTTGGCTGTTGTACGAAAGCTCAAGGAAAAGAAGGAAACCAGAGCTTGCATAGTATTCCCTGATAAACCAGAAAAGCGCCGGGCCTGTCAATTGTTCAAAGCAGCTCTAGATTCAATTGATGGCATTACCATAGGTTCCTTAGATGATGTCCCTACTGGACCTATGACTTCATTTTTCAGATCTGTCAGGAACACCCTTGATTTTGATTTCGAAGATGACAATGAAGGTCGTTGGCAATCTAGTGAACCTCCATCACTCTACATATTCATTAACTGCAGTACACGTGAACTTGCATATATAGAGAAGTATGTGGAAAAATTTGCCACATCAACACCAACACTTTTATTTAATCTTGAACTAGACACACTACGTGCTGATTTAGGCCTCCCGGGCTTCCCAGCCAAAGATTTGCACTACCGCTTTCTTTCTCAATTCACTCCAGTGTTCTACATCCGAATCAGAGAGTATTCAAAGACAGTTGCAATAGCACCTTATATTGTCAATTACAGTGGAGCTGTATTCCGCCAGTACCCAGGTCCTTGGCAGGTGATGCTTAAACAAGCAGATGGTTCTTATGCTTGCATAGCAGAAAGTGCAAACCGCTTCAGCCTTGGCGAGGCCAAAGAGGAATTGTTGAGGGTCTTGGGACTTCAAGAAGAAGAGGGAAGTTCCCTAGAATTTCTTCGAAGAGGCTACAAGGCAAGCACGTGGTGGGAAGAAGATTTTGATTCAGAAGTATCTTCTGCATGGCGGAGTTGA 1146 0.4442 MVMAMAISSPSYNLTFLLPRSGSLQPLSLTPPSCSFFAQPLRNLSLKFCAKIQSVGVGREGPASDPKAGVSLYKPKSYEVLVSDAANSLSYALQDGKLRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLKEKKETRACIVFPDKPEKRRACQLFKAALDSIDGITIGSLDDVPTGPMTSFFRSVRNTLDFDFEDDNEGRWQSSEPPSLYIFINCSTRELAYIEKYVEKFATSTPTLLFNLELDTLRADLGLPGFPAKDLHYRFLSQFTPVFYIRIREYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACIAESANRFSLGEAKEELLRVLGLQEEEGSSLEFLRRGYKASTWWEEDFDSEVSSAWRS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1827 381 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 23 381 IPR044687 -
Gso8g1827 381 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 23 381 - -
Gso8g1827 381 Pfam Domain of unknown function (DUF1995) 75 337 IPR018962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1827 Gso-Chr8 17892950 17905307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1827 - - gmx:100803725 755.747