Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1812 ATGCCGCTGATATTAGCGAAAAGCGATTCGATCCAGATTCGCGAGGTGTGGAACGATAACCTGGAAGAGGAGTTCGCGTTGATTCGCGAAATTGTGGACAACTACCCTTACATCGCCATGGACACGGAGTTTCCGGGGATCGTTCTCCGACCAGTGGGGAATTTCAAAAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTCGACATGCTCAAACTCATCCAATTGGGCCTCACCTTCTCCGACGAGCACGGCAACCTTCCCATGTGCGGCGGCGACGACGAAGAATCCGACACGTGCTGCTGCATCTGGCAATTCAACTTCCGCGAATTCAACGTCAACGAGGACGTCTTTGCCAACGACTCCATCGAGCTCTTGCGCCAAAGCGGCATCGATTTCAAGAGGAACAACGAAAACGGCATCGACGCCCACCGTTTTGGGGAGCTTCTCATGTCCTCCGGGATCGTCTTAAACGACAACATTCATTGGGTTACTTTCCACAGTGGTTACGATTTCGGGTACTTGTTGAAGCTTTTGACGTGTCAGGATTTGCCCGATACGCAAGTTGGGTTCTTTAATTTGATAAACATGTATTTCCCCACTGTGTATGACATAAAGCACCTCATGAAGTTCTGCAACAGCCTCCATGGAGGCTTGAACAAGCTCGCTGAGTTGTTGGAGGTCGAGAGGGTTGGGATTAGCCATCAGGCCGGCTCCGATAGCTTGCTCACTTCCTGTACATTCAGGAAATTGAAGGATAATTTCTTTAGTGGCTCCTTGGAGAAGTATGCAGGTGTCTTGTATGGGTTAGGTGTTGAGAATGGACAAGGTTCTCATTGA 846 0.4929 MPLILAKSDSIQIREVWNDNLEEEFALIREIVDNYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPMCGGDDEESDTCCCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNIHWVTFHSGYDFGYLLKLLTCQDLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGISHQAGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGSH* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1812 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 280 IPR039637 GO:0004535|GO:0030014
Gso8g1812 281 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 4 280 - -
Gso8g1812 281 Gene3D - 1 276 IPR036397 GO:0003676
Gso8g1812 281 SUPERFAMILY Ribonuclease H-like 4 274 IPR012337 -
Gso8g1812 281 Pfam CAF1 family ribonuclease 16 143 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1812 Gso-Chr8 17745251 17746622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1812 K12581 - gmx:100799461 585.489