Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1790 ATGCCTTCTCTAAGACCCACCATGTCAAATGCTCATTCTAAATTAACCTTTGATGAGCTCCGATGGGTGATTAACATCCGAAAAACCCTTGAAGAAGAGCTTGAGGAAGATGGTGATCAATTTGCTGTGTCCATCTTCAGCGTGCCAAAGCTCCTTATGGCTAGTGATCCAGACTCTTATGTCCCTCAACAGGTTGCACTTGGCCCTTACCATTATTGGCGTCCAGAGCTATATGAGATGCAAAGGTACAAGATTGCTGCAGCAAAAAGATTCCAGAAACACCATCAAAGCTGCAAGTTAGAGAATCTCGTTGATCAATTGACCAAGTTGGAGCAAAGGGTTCGAGCATGCTACCACAAGTTCTTGGATTTCAACGGGGAAACGTTGGTGTGGATGATGACGGTTGATGCCTCATTCTTGCTTGAGTTTCTTCAAGTTTTTTCCATGCAAGAAGGGGCCAAGGTACAAAGGGTTTCTTCTAGCATGTCTCATTTGGTGGATTATGCTGGGAAGAAATCAGCTCATAATGCAATTTTGAGGGACATAGTAATGCTTGAGAATCAAATCCCATTGTTTGTGTTGAGAAAGATGCTTGACCTCAAATTCTCATCACTTGAAGCTGCAGATGACATGCTGAGCTTGATGTTCATAGGGCTTTTCAAAGAGATTTCTCCTTTCAAGATGATGGAGGAGTATCCAAACATTCAAGTCTCGGAAAATGTGCATTTGCTAGATTTCTTGTATAATGTGATAGTGCCCAAATTAGAACAACAGTCAGACACAATTGAAGTTGAGTTTCAACAAGAACAAAAGGAAGGAAATGATGAAGAAGCAACCTCAGACTCCAGTCATGTTAAGCAATTCTTCAGCGAAGTATGGAAGCTGCTTTCAAAACTAAACAAAGGGCCAATGAAGATGGTGAAAAAGGTAATTGTATCTAAACCTCTCAAAGTCTTTGTTCAGTTGCCTTGGAAAATCGTGTCCAACCTTCCAGGACTTAAGGTTATGAAGCAACCTCTTGAACATTTCTTATTCTCTCAAGAAAAAGGAGATGAAAATAAGGGAGAAAGTGCGAGTTCAAGATCCAATAGTCTCATGAACAAGCCACCCTCAGTGGAGGAAATCACTATTCCTTCCGTTACAGAACTCTTGAATTGTGGCATTCGTTTCGTACCTACCAAGGGAAGCATATCAAGCATCAGTTTTGATGTGAAAACATGCACGTTTTACCTTCCCACAATAGGTTTGGACGTTAACACTGAAGTTTTCCTGAGAAATTTGGTTGCATATGAAGCATCAGTTGCATTGGGGCCATTGGTTATAACCCGTTACACTGAGTTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAAGGTTCTCAGAGAAAAAGGGATCATTCTGAACCACTTGAAGAGTGATAAAGAAGTGGCTAACTTGTGGAATGGGATGAGCAAGTCCTTGAGATTATCAAGGGTGTCATTATTGGATAAGGTCATTGAAGATGTTAACAAGTATTACAATGGTAGAATGAAGGTCAAAATTTGGAAATTCATGAGAGTTTATGTGTTCAGTTCCTGGCAGTTTTTGACATTCCTAGCTGCCCTATGCCTTTTGCTCTTGATGGCTTTGCAAGCTTTCTGCTCTGTCTACACTTGTAGTCGTTTTTTCCAATCTGCACTAGATTCCCAGTGA 1695 0.41 MPSLRPTMSNAHSKLTFDELRWVINIRKTLEEELEEDGDQFAVSIFSVPKLLMASDPDSYVPQQVALGPYHYWRPELYEMQRYKIAAAKRFQKHHQSCKLENLVDQLTKLEQRVRACYHKFLDFNGETLVWMMTVDASFLLEFLQVFSMQEGAKVQRVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPLFVLRKMLDLKFSSLEAADDMLSLMFIGLFKEISPFKMMEEYPNIQVSENVHLLDFLYNVIVPKLEQQSDTIEVEFQQEQKEGNDEEATSDSSHVKQFFSEVWKLLSKLNKGPMKMVKKVIVSKPLKVFVQLPWKIVSNLPGLKVMKQPLEHFLFSQEKGDENKGESASSRSNSLMNKPPSVEEITIPSVTELLNCGIRFVPTKGSISSISFDVKTCTFYLPTIGLDVNTEVFLRNLVAYEASVALGPLVITRYTELMNGIIDSEEDAKVLREKGIILNHLKSDKEVANLWNGMSKSLRLSRVSLLDKVIEDVNKYYNGRMKVKIWKFMRVYVFSSWQFLTFLAALCLLLLMALQAFCSVYTCSRFFQSALDSQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1790 564 Coils Coil 252 272 - -
Gso8g1790 564 MobiDBLite consensus disorder prediction 349 369 - -
Gso8g1790 564 Pfam Plant protein of unknown function 45 541 IPR004158 -
Gso8g1790 564 PANTHER UPF0481 PLANT-LIKE PROTEIN 4 554 - -
Gso8g1790 564 Coils Coil 93 120 - -
Gso8g1790 564 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 4 554 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1790 Gso-Chr8 17517749 17519550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1790 - - gmx:100806933 1071.61