Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1788 ATGGATTCCAATAATTGGAGACCCAATCAAGGTACTAACCCCACTATGGATACAAGTGATTGGAGAGCTCAACTACCAACTGATTCACGCCAAAGAATTGTCAACAAAATAATGGATACATTAAAAAAACATCTTCCTGCTTCTGGTCCTGATGGATTGCATGAACTTCGGAAGATTGCTCAAAGGTTTGAAGACAAGATTTATACTGCTGCAACAAGCCAGCCTGATTACCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGACTAAATCCCAAAACACCTTGGCTAACAATATGCCACCAAATCAAGTTGGCCCTAGCAATAAACCTCCTGATCAAGGGCTTGTTTTGCAGTCTCAAGTTCATAATCTTGGGCAACAGCATTCTATTCCTTTGTCTAGTCAGCTCCAGCCACATCAGCAGCTTGTATCTCAAAATGTTCAAAACAATGTTGCATCTCAACCTAACCTTCCACCTGTATCTAGTCTAGCCCAGACTACCAGCCAAAATATTGTCCAGAACTCCAACATGCAGAATATAACTGGGCCAAATTCAGTTGGGAGCACTATTAGCCAAAATTCCAACTTACAGAATATGTTTCCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGATTGTTCCCCCACAGAATTCACCGCAATATCTTTACCAACAGCAGCGTTTGAAGCAGAAGCAGCTTCAATCTCAGATGCAGCAACAACAACAAAACCTTCTGCAACCAAATCAGTTGCAATCTTCTCAGCAATCCATTATGCAAACTTCATCTGTTATGCAGCCATCCATGATGCAAACATCTTCTCTATCTAGCATTCCACAGAATCAACAGTCTACTAATGTTCAACAGTCAATGCAGTCCATGCCACAGCAGCACTCACAAGTTATCAGGCATCAGCAACAACAGACTTCTATTGTACATCAGCAACAAATACCAGTCACTCAACAGCCAAGCTTACCTGCACAACAGCAACAACAACTTATGGGGCATCAGCCAAATACAACAAACATGCAACATGCACAGATGCTTGGGCAACAGAACAATGTTGGTGATATACAGCAACCACAGAGGATGCTCTCACAACAGAGTAATCTTACAAACCTGCAACAGAGACAACAGTTAATAAATCAGCAAAACAACCCAGCAAATATACATCAACAATTGGGAAATAATGGCCCTGGGTTACAGCAGCAACATTTGCTTGGACATGAATCTGGCAATGCTGACATGCAAACAAGTCATCACTCTGCACACATGTTGCAACAACCAAAGGTTCCAATGCAGCAACAATCACAACAAAGTACATCAAATTTGTTGTTACCTCATTCACAGCAGTCACAACCACTGGGTTCACAACAGCAATTAATGCCACAGATTCACACTCAGTCTGCACAGTTGCAACAGCAATTGGGTTTGCCGCAGCAGCTAAATCCCTCACAAAGAGATATGCAGCAAAGAATTCAAGCGTCAGGGTCCTTACTTCAACAACAAAATGTTCTTGATCAACAGAAGCAGTTGTATCAGACTCAAAGAACTCTTCCAGAAACATCAGCAACTTCTCTGGATTCTACAACACAGACTGCACAACCAAGTGGGGCTGATTGGCAAGAAGAAGTATACCAGAAGCTCCAAACCATGAAAGAAAGTTACTTACCAGAGATGAATGAAATGTATCAAAAAATTGCTAATAAACTTCATCAGCATGATTCTCTTCCCCAACAACCAAAGTTAGATCAGATTGATAAGCTGAGGGCATATAAATCGATGTTGGAGCGTATGATGGCACTCCTACAGATTCCCAAGAACAACATTTTGCCTAATTTCAAGGAAAAACTGGGATCATACGAGAAGCAGATTATAAATCTTCTCATAAATTCAAATAGACCCAGGAAAGGCATGAATTCAGTACAGGCAGGACATCATCCCCCAACTCACATGTCTTCCATGCAACAGCCACAATCCCAAGTTACTCAAGTACATTCTCATGAAAATCAAATGAACTCTCAGTTGCAGTCAACAAATTTACAGGGTTCTGTACCAACCATGCAGCAGAATAATATTGCAAGCATGCAGCACAATTCTTTGTCTGGTGTATCAACAGGACAACAGAATATGATGAATTCAATGCAACCTGGAACTAATTTAGATTCTGTTCATGGAAATTCTGTGAACTCCCTTCAACAGATTCCAATGAACTCCCTCCAACAAAACCCTGTTAGTACAGCTCAACAGACTAACATTAATTCCTTACCATCGCAAGGTGGGGCAAATGTGATTCAACCAAATGCCCTTCAGTCAGGTTCCAGCGCACTTCAACACCAACTGAAACATCAGCAGGAACAGCAGATGCTGCAGAGTCAACAACTCAAACAACAATATCAGCGACAACAACTGATGCAGAGGCAGCTCCTGCAGCAGCAGCAGCAACTACACCATCCAGGAAAGCCACAGCTATCTTCGCAATTGCAGACACATCAAATGCCTCAACTTCACCAAATGAATGATATAAATGATATAAAAATGCGACAAGGAATGGGTGTTAAGTCAGGTGTCTTTCAGCAGCATCTTACATCAGGTCAACACTCAACATATTCCCATCAGCAGCTGAAACAAGGGAGTGCATTTCCTGTTTCTTCACCCCAACTCCTTCAGGCTGCCTCTCCTCAGATTCAGCAACACTCATCTCCCCAGGTTGACCAACAAAATCATCTCCCATCTAAAACAAAAGTCACAACTCCTCTGCAATCTTCTAATTCACCCTTTGTGGGACCTACCCCTTCACCTCCCCTGGCTCCATCTCCTATGCCAGGAGAGTCTGAGAAGTCTATTCCTTGTGTTTCATCAATATCAAATGCTGCAAATATTGGACTTCAACAAACAGGGGGTGCAGTAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTTGTCCTGATGGTGCACATGGTAATGCTTTAGCTGCCACTTCTGGGAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCCTAATTAATGCGGTGAAATCAATTTCGCGTAAAGCATTAAGTGCTGCGGTCATGGATATTGGTTCAGTTGTCAGCATGAATGATAGAATAGCAGGATCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGTCTACAGGCTAGAAATTTCATTGCACAAGATGGTTCCAATGGAATTAAGAGGATGAAACGTTACACCAGTGCTATTCCCTTGAATGTTGTGTCATCTCCTGGTAGCATGAATGATAGTATCAAGCAGTTAACTGCTTCAGAGACTTCTGATCTGGAGTCAACTGCAACATCCAGTGTCAAGAAACCAAAGATTGAGGTTAATCATGCCCTTTTGGAAGAAATAAGGGAGATTAATCACCGACTTATTGACACAGTAGTAGACATAAGCAATGAAGATGTTGATCCAACAGCTGCTGTTGCTGCTGCTGAAGGGGCAGAAGGGATTATTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCATCGCAGATGTCACCTATTCAGCCCCTGCATTTGCTGGTTCCTGCAAATTATCCTAATTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAAGGAGAATGAAGATCTTTCAGTGAAAGCAAGGTCAAAGTTTAGCACATCTTTACGCAGTTTATCACAACCTATGTCACTTGGGGAGATAGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCACAGCAGAGTGGGGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGTTTGACCACCAACTAA 3915 0.4255 MDSNNWRPNQGTNPTMDTSDWRAQLPTDSRQRIVNKIMDTLKKHLPASGPDGLHELRKIAQRFEDKIYTAATSQPDYLRKISLKMLTMETKSQNTLANNMPPNQVGPSNKPPDQGLVLQSQVHNLGQQHSIPLSSQLQPHQQLVSQNVQNNVASQPNLPPVSSLAQTTSQNIVQNSNMQNITGPNSVGSTISQNSNLQNMFPGSQRQMPGRQQIVPPQNSPQYLYQQQRLKQKQLQSQMQQQQQNLLQPNQLQSSQQSIMQTSSVMQPSMMQTSSLSSIPQNQQSTNVQQSMQSMPQQHSQVIRHQQQQTSIVHQQQIPVTQQPSLPAQQQQQLMGHQPNTTNMQHAQMLGQQNNVGDIQQPQRMLSQQSNLTNLQQRQQLINQQNNPANIHQQLGNNGPGLQQQHLLGHESGNADMQTSHHSAHMLQQPKVPMQQQSQQSTSNLLLPHSQQSQPLGSQQQLMPQIHTQSAQLQQQLGLPQQLNPSQRDMQQRIQASGSLLQQQNVLDQQKQLYQTQRTLPETSATSLDSTTQTAQPSGADWQEEVYQKLQTMKESYLPEMNEMYQKIANKLHQHDSLPQQPKLDQIDKLRAYKSMLERMMALLQIPKNNILPNFKEKLGSYEKQIINLLINSNRPRKGMNSVQAGHHPPTHMSSMQQPQSQVTQVHSHENQMNSQLQSTNLQGSVPTMQQNNIASMQHNSLSGVSTGQQNMMNSMQPGTNLDSVHGNSVNSLQQIPMNSLQQNPVSTAQQTNINSLPSQGGANVIQPNALQSGSSALQHQLKHQQEQQMLQSQQLKQQYQRQQLMQRQLLQQQQQLHHPGKPQLSSQLQTHQMPQLHQMNDINDIKMRQGMGVKSGVFQQHLTSGQHSTYSHQQLKQGSAFPVSSPQLLQAASPQIQQHSSPQVDQQNHLPSKTKVTTPLQSSNSPFVGPTPSPPLAPSPMPGESEKSIPCVSSISNAANIGLQQTGGAVAPAQSLAIGTPGISASPLLAEFSCPDGAHGNALAATSGKSTVTEQPLERLINAVKSISRKALSAAVMDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFIAQDGSNGIKRMKRYTSAIPLNVVSSPGSMNDSIKQLTASETSDLESTATSSVKKPKIEVNHALLEEIREINHRLIDTVVDISNEDVDPTAAVAAAEGAEGIIVKCSFIAVALSPSLKSQYASSQMSPIQPLHLLVPANYPNCSPILLDKFPVESSKENEDLSVKARSKFSTSLRSLSQPMSLGEIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1788 1304 MobiDBLite consensus disorder prediction 891 948 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 177 218 - -
Gso8g1788 1304 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Gso8g1788 1304 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 92 IPR036529 GO:0003712|GO:0006355
Gso8g1788 1304 MobiDBLite consensus disorder prediction 701 728 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 636 677 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 520 540 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 647 677 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 413 476 - -
Gso8g1788 1304 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 1303 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 95 116 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 1 24 - -
Gso8g1788 1304 Coils Coil 783 813 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 235 315 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 743 767 - -
Gso8g1788 1304 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 1303 IPR044661 GO:0003713|GO:0031490
Gso8g1788 1304 Pfam KIX domain 19 98 IPR036546 -
Gso8g1788 1304 Coils Coil 225 245 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 891 928 - -
Gso8g1788 1304 MobiDBLite consensus disorder prediction 811 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1788 Gso-Chr8 17480969 17494835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1788 K14972 - gmx:100805336 2180.99