Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1787 ATGGATTGGTTCTCCTGGCTTTCCAAAACAGGCCTTGAGCCAACCCTAGTGTATGAGTATGGCCTTACTTTTGCTCACAACGAGCTTGAAGAAGAAGACATAACATACTTCAACCATGAGTTTCTCATGAGCATGGGAATCTCCATAGCCAAACACAGGCTAGAGATTCTCAAGCTTGCAAGGAAAGTGAAGGGAAAGAGGGCGGCACCACCACGCCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGCTTAGCCAATTACATTCGCTCGTTCATCAGCACTTGTGAAGAAGAGTCATCAGCACTTGTGGTGGTGCCATCATCATCATCAAGGTCTTATTATGGGACAAGATGGAAGAGTAATCATGTGATGAAGAGGAACAAAAAGATGGTGGTGGCTAAGCAAGAGAGGCTCTTGCTCACAAATGGAAGCCCTAATACTGTTGTGCATGGTCTTGATGCTTTCACTAGTCCTAATATTGTTTATCATTTCCAAAAGGATGAACAAATGGAAGGAGATGATGGATATTGGTCTTCAGCTGCTACTGAACAAATCAGAAGAAGGGGGGAAAAAGATGGAGGTGCATGTCCCACACCCTACGCATGTAACAAGATGATCTTCATTTCTTACTCAAAGTGGTGA 654 0.448 MDWFSWLSKTGLEPTLVYEYGLTFAHNELEEEDITYFNHEFLMSMGISIAKHRLEILKLARKVKGKRAAPPRPVARLMVAIKRTKRCLANYIRSFISTCEEESSALVVVPSSSSRSYYGTRWKSNHVMKRNKKMVVAKQERLLLTNGSPNTVVHGLDAFTSPNIVYHFQKDEQMEGDDGYWSSAATEQIRRRGEKDGGACPTPYACNKMIFISYSKW* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1787 217 ProSiteProfiles SAM domain profile. 1 66 IPR001660 GO:0005515
Gso8g1787 217 CDD SAM_superfamily 2 62 - -
Gso8g1787 217 SUPERFAMILY SAM/Pointed domain 5 66 IPR013761 -
Gso8g1787 217 PANTHER OSJNBA0033G05.11 PROTEIN 1 191 - -
Gso8g1787 217 PANTHER OSJNBA0033G05.11 PROTEIN 1 191 - -
Gso8g1787 217 Gene3D - 1 69 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1787 Gso-Chr8 17478206 17479774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1787 - - gmx:100500342 422.55