Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1785 ATGTCCCCACCCACCACTCTTTTTCTTGCACTCACTCCCAAGTTTTCAAGTTCACCTGCAACAGCAACACGAGAGCCACTCAGTGATCGCTTCTCTTCTTCTTCATCTTACTGTGTCAGGATGGGGGGAGCATGTTCTAGGAAGCAAGAGTGGGATAACGAAGATAGTCTTATCAGAGGACTACCACGAAGATATTGCAAATGCGGAAGTTTGAAATGGTGGACATCCTCTTTTTCTTATCCATCTGTAGATTTTCACCTACGAAAAGGAGAATGTCCGTCACTGTTGGACTTATGCATACAGAAAATAAACGAGGATATTGATAAATATAACACATTTTCTATGCTACCACGAGATATAAGTCAGCTAATTTTCAATAATTTGGTTTACTCCCGATGTCTAACCAGTGCTTCCCTTGAAGCTTTTCGAGATTGTGCTCTCCAGGATCTTTACTTGGGAGAATATGATGGTGTTAATGATAATTGGATGGGCGTCATCTCATCCCAGGGTTCATCTTTACTTTCTGTGGATCTTTCTGGGTCTGATGTCACTGATTTAGGGCTGACATACCTTAAAGATTGTGAAAGTCTCATTTCCTTAAATCTAAATTACTGTGACCAAATTTCAGATCGTGGACTAGAGTGTATCAATGGTCTGTCAAACTTGACAAGTTTGAGTTTCAGAAGAAATGATTCAATTTCTGCTCAAGGAATGAGTGCCTTTTCCGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCCGGGATTCATGGAGGCCTTGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTGAAGTGGTGTAACTGCATAAAAGATTATGATATGAAACCTCTTTCAGAGCTTGCAAGCCTGAAAAGTCTAGAGATTTCTTCCAGTGACGTCACTGATTTTGGCATCAGTTTTCTAAAAGGGTTACAGAAGCTTGCCCTTTTAAATTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCCTTCTCTCTGACAATGGGTGCAAAAAATTTTCACGACTCGAAAATTTGAAAGTATTAAACTTGGGATTTAATGTCATAACAGATGCATGTTTAGTTCACTTGAAAGGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCTTGTAAGATTGGTGATGAAGGATTGGTCAATTTGGCTGGCCATAAACAATTGAACTGCTTGGAATTGTCGGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGGTTGTCTAGTCTGCAGAAAATAAATCTGTCTTTTACCATGATTAGTGATAGTAGTTTAAGGAAATTGTGCGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTTACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTGACTGGCCTCACTGACCTGGATTTGTTTGGTGCACGAATCACAGATTTTGGGACAAACTATTTGAAAAAATTTAAGAACCTGAGGTCCTTGGAAATATGCGGTGGAGGATTGACTGATACTGGTGTGAAAAATATTAAAGAGCTTTCTTCTCTAGTGTGCTTAAATTTATCACAAAACAGCAACCTTACAGACAAAACCCTGGAGTTAATTTCTGGGCTTACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACTAATGCTGGACTGCAGCATTTGAAGACACTGAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACAGCAAATGACATCAAGAAACTGAAATCAATGTACCTCCCAAATTTGGTAAGCTTTCGGCCTGGGTAG 1854 0.4008 MSPPTTLFLALTPKFSSSPATATREPLSDRFSSSSSYCVRMGGACSRKQEWDNEDSLIRGLPRRYCKCGSLKWWTSSFSYPSVDFHLRKGECPSLLDLCIQKINEDIDKYNTFSMLPRDISQLIFNNLVYSRCLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDLGLTYLKDCESLISLNLNYCDQISDRGLECINGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCIKDYDMKPLSELASLKSLEISSSDVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCLLSDNGCKKFSRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKIGDEGLVNLAGHKQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLRKLCGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGGLTDTGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSMYLPNLVSFRPG* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1785 617 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 42 573 - -
Gso8g1785 617 SUPERFAMILY RNI-like 124 409 - -
Gso8g1785 617 SMART LRR_CC_2 509 533 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 389 413 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 268 293 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 558 582 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 341 365 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 194 219 IPR006553 -
Gso8g1785 617 SMART LRR_CC_2 461 485 IPR006553 -
Gso8g1785 617 Pfam Leucine rich repeat 342 402 IPR001611 GO:0005515
Gso8g1785 617 Gene3D Ribonuclease Inhibitor 445 519 IPR032675 -
Gso8g1785 617 Gene3D Ribonuclease Inhibitor 520 612 IPR032675 -
Gso8g1785 617 Gene3D Ribonuclease Inhibitor 260 336 IPR032675 -
Gso8g1785 617 Gene3D Ribonuclease Inhibitor 159 259 IPR032675 -
Gso8g1785 617 Gene3D Ribonuclease Inhibitor 374 444 IPR032675 -
Gso8g1785 617 PANTHER UNCHARACTERIZED 42 573 - -
Gso8g1785 617 SUPERFAMILY RNI-like 313 606 - -
Gso8g1785 617 Pfam Leucine Rich repeat 194 216 IPR001611 GO:0005515
Gso8g1785 617 Pfam Leucine Rich repeat 220 242 IPR001611 GO:0005515
Gso8g1785 617 Pfam Leucine Rich repeat 269 290 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1785 Gso-Chr8 17418306 17427762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1785 263 469 Receptor kinase-like Gene Family AT1G75820 26.316 2.42e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1785 - - gmx:100795219 1164.06