Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1779 ATGGTTTTTTCTGCTGTGTTCACTCCCGCTCTCAACCTTGCCATTTCATCCACCACATACTGTTGTAGAAGAAGAAGAACATCATCAACCACAAGAAGAGTTGTTACAGTGAAAGCTAACTCAACAAAGAAAGATGAATCCAAGGACAAAGATGCTCCAGCGTTCAACCCTTTTGGATTTGTCACTGACAACCCTTCTAGCCGCAGTGCTATTCAACTGCCTGAAAACCCTGCTGAAGATGGCAACGTTGGACAAATGCTATATAGGATAGAAGACAAGGGCAAGGAATATGGGTCATATGTTAAATCTGGCAAGCTAAGATGGTTTGTAAGAGAAACTGGATCAGCAAATGGCAGAAGAGGAACAATTATCTTCCTTCATGGGGCCCCTACACAATCTTTTAGCTACCGAGTTGTCATGTCTCAGTTGTCGGATGCAGGGTTCCACTGCTTTGCACCTGACTGGATAGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGATGCATTGGATAAGCTGCTTGAGGTGCTGGGGGTCAAATCTCCCTTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGTTCATATGGATTAACTTGGGCACTGAAGAACTCGAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCCTTAACAGATTCGTCTCCCATTCCTGGACTTTTTCAGAAGCTAAGAATTCCTCTATATGGTGAATTTACCAGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGGAGGTAGCCCTTACGTTCTGAAAAATGAAAAGGCTGACGTGTACCGGCTACCTTATTTGGCAAGCAGTGGACCTGGATTTGCTCTACTTGAAGCTGCAAGAAAAGCTAACTTCAAAGGTACTTTCAGTGAAATAGCAGCAGGATTTGCAACTGACAGATGGGATAAACCAATACTACTTGCTTGGGGATTATCAGACAAGTACTTGCCCCAGTCTGTAGCAGAGCAGTTTCAGAAAGGAAATCCAGCACAAATCCAGCTTAAATTGATTGAAGGAGCTGGTCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGATACTTTCAGAGTGTTCTTCTTCTGA 1131 0.4297 MVFSAVFTPALNLAISSTTYCCRRRRTSSTTRRVVTVKANSTKKDESKDKDAPAFNPFGFVTDNPSSRSAIQLPENPAEDGNVGQMLYRIEDKGKEYGSYVKSGKLRWFVRETGSANGRRGTIIFLHGAPTQSFSYRVVMSQLSDAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTDSSPIPGLFQKLRIPLYGEFTSQNAIIAERFIEGGSPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFSEIAAGFATDRWDKPILLAWGLSDKYLPQSVAEQFQKGNPAQIQLKLIEGAGHMPQEDWPEKVVDTFRVFFF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1779 376 Pfam Alpha/beta hydrolase family 123 369 IPR000073 -
Gso8g1779 376 Gene3D alpha/beta hydrolase 94 375 IPR029058 -
Gso8g1779 376 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 96 375 - -
Gso8g1779 376 SUPERFAMILY alpha/beta-Hydrolases 99 374 IPR029058 -
Gso8g1779 376 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 96 375 - -
Gso8g1779 376 PRINTS Alpha/beta hydrolase fold signature 147 162 IPR000073 -
Gso8g1779 376 PRINTS Alpha/beta hydrolase fold signature 211 224 IPR000073 -
Gso8g1779 376 PRINTS Alpha/beta hydrolase fold signature 320 334 IPR000073 -
Gso8g1779 376 PRINTS Epoxide hydrolase signature 127 145 IPR000639 GO:0003824
Gso8g1779 376 PRINTS Epoxide hydrolase signature 147 162 IPR000639 GO:0003824
Gso8g1779 376 PRINTS Epoxide hydrolase signature 352 374 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1779 Gso-Chr8 17338071 17348024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1779 60 172 Acyl Lipid Metabolism Gene Families AT4G15960 26.316 5.20e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1779 - - gmx:100793646 732.25