Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1771 ATGGCTCTCCTCACATCCCAACCTAAAAACCCCATTCTCCATCGCTTCACCACCCTTCACTGCCCTCTTCCACGCTTACATAGAACCGTTCTTGGTCTTGGCTCCTTCTCTCACAACAGTGCTCTCTCCACTAAAAAACTTAACTTTAACCCAACGCAAACCAAAATTTCCCTTCAAAACAACCCCTTTACCTATAATTTGGCAGTGACAGCCAAAGCCAATGCCAATGCTGCATTTGGAGAAGGTTTCAAGGAGGAAGGGGCATCGAGACACAGAAAGATTTTGTTGTCAGAGGTTGAGGTGAAGAGAGAGAGGAGAGTTTTCTTTGGCAGAAAATGGAACTCTTTGGATTTTGGCACTGCTGGAATTGTGTTGGCAATGCATCTCCTTTGCGTCTTTGCTCCATTCCATTTCAATTGGCCAGCTTTTTGGGTGGCTGTGGCTCTCTATATTGTCACTGGCCTTTTTGGTATCACTCTTTCTTTCCATAGGAACCTTTCTCACAGGAGTTTCAAGCTTCCCAAATGGCTTGAATACTTCTTTGCCTATTGTGGGGTCCTGGCTCTTCAGGGGAATCCGATTGATTGGGTGAGCACACATAGGTACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCAACTGAAGGATTCTGGTTCAGTCATATGAGTTGGCTATTTGATACCAATTCTGTCCTAGAAAGGTGTGGAGAGGCAAACAATGTTGGTGATTTGGAGAAACAATCCTTCTATAGATTTCTCCGAAGCACTTACCTTGCCCACCCTTTTGCTTTGGGAGCCCTTTTATATGCCGCAGGAGGATTTCCTTTCCTTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTCTGGGGGAATCAAGCATGGAACACCAGGGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTACTCAGCTAGACATGGACTTGAGTGGTGGCAAATAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGACGTCAAGTTACCCACAGAGAGTCAGAAGCAGAAAATGGCATTCAATAGTGATTCAATTGCCACATGA 1173 0.4544 MALLTSQPKNPILHRFTTLHCPLPRLHRTVLGLGSFSHNSALSTKKLNFNPTQTKISLQNNPFTYNLAVTAKANANAAFGEGFKEEGASRHRKILLSEVEVKRERRVFFGRKWNSLDFGTAGIVLAMHLLCVFAPFHFNWPAFWVAVALYIVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSVLERCGEANNVGDLEKQSFYRFLRSTYLAHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQIDMTWYVVRFLQAIGLATDVKLPTESQKQKMAFNSDSIAT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1771 390 Pfam Fatty acid desaturase 140 359 IPR005804 GO:0006629
Gso8g1771 390 PRINTS Fatty acid desaturase family 1 signature 163 183 IPR015876 GO:0016717
Gso8g1771 390 PRINTS Fatty acid desaturase family 1 signature 200 229 IPR015876 GO:0016717
Gso8g1771 390 PRINTS Fatty acid desaturase family 1 signature 285 306 IPR015876 GO:0016717
Gso8g1771 390 PRINTS Fatty acid desaturase family 1 signature 328 342 IPR015876 GO:0016717
Gso8g1771 390 PANTHER ACYL-COA DESATURASE 69 385 IPR015876 GO:0016717
Gso8g1771 390 CDD Delta9-FADS-like 140 371 IPR015876 GO:0016717
Gso8g1771 390 PANTHER BNAC05G37460D PROTEIN 69 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1771 Gso-Chr8 17263102 17265228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1771 1 386 Lipid Metabolism Gene Families AT3G15850 63.683 5.38e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1771 K20416 - gmx:100527024 814.683