Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1770 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTCCTCGCCTTTCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTCTCCGAGGTTGTCAACATTTATTTCCACGAATCCGAAAAGCTTCTCAGAAATCTCAGAGCTTTGCTGATGGAGAAGGAGTTTTCGGACTATAAGAAAATGGGGATCCATTTGAATCAGTTCATGGGTAGCAGTTCCAGTATTGGCGCCAAGAGAGTTAGAAATGTTTGCGTTGCCTTTCGTGCCGCTACTGAACAGAATAACCGTGCTGGTTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCACGAATTGTTCCAAATTGAACAGCAACGTGCTTTGGCCGCAGGAGTAAGGTACCCGGTGCAGAATTAA 471 0.4798 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRALLMEKEFSDYKKMGIHLNQFMGSSSSIGAKRVRNVCVAFRAATEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1770 156 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Gso8g1770 156 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Gso8g1770 156 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Gso8g1770 156 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Gso8g1770 156 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Gso8g1770 156 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1770 Gso-Chr8 17252198 17254526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1770 K14490 - gmx:100789608 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0071 15 607215 609021 Gso8g1770 8 17252198 17254526 PCT
Gso8g1770 8 17252198 17254526 Gso15g0071 15 607215 609021 PCT