Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1767 ATGAACAAGATGACTGGTCTTGCTCTTGGTGGAGTGGTGGCGGCTATTTTAATGGTTCTACAGTACGCAGAGGCACAGACAAGTTACGTTGTTGGAGATGGCACGGGTTGGAGAGTTCCACAAGATGCTTCCACATACCAAAATTGGGCTTCTGACAAGAATTTCACAGTTGGAGATACTCTATCATTCATTTTCCAGACAGGGTTGCATAACGTAATTGAAGTGTCGGAAGAGTCATACAATTCGTGCAGTTCAGCGAATCCTATAGGTACAACCTACAACACGGGCCCTGCCAACGTTACACTGAACAGAGGTGGTGAACATTACTACATTTGTAGCTTTGGTAATCACTGCAACAATGGGCAGAGGTTAGCCATCACTGTCTCTGGCTCTTCCACCGCCTTTCCACCAGCCACCACCACCGCTCCGCCACCACCTTCGTCTTCCGCGCCCTCTTCTTTCCATACTACTGTCCTTCCCTTCCTCTTCCTCTCCGCATTTGTCTTTATAGCGTTTTAG 519 0.4798 MNKMTGLALGGVVAAILMVLQYAEAQTSYVVGDGTGWRVPQDASTYQNWASDKNFTVGDTLSFIFQTGLHNVIEVSEESYNSCSSANPIGTTYNTGPANVTLNRGGEHYYICSFGNHCNNGQRLAITVSGSSTAFPPATTTAPPPPSSSAPSSFHTTVLPFLFLSAFVFIAF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1767 172 ProSitePatterns Type-1 copper (blue) proteins signature. 106 122 IPR028871 -
Gso8g1767 172 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Gso8g1767 172 PANTHER BLUE COPPER PROTEIN 13 162 IPR039391 GO:0009055
Gso8g1767 172 Gene3D - 27 139 IPR008972 -
Gso8g1767 172 PANTHER UMECYANIN-LIKE 13 162 - -
Gso8g1767 172 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Gso8g1767 172 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1767 Gso-Chr8 17221441 17222432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1767 28 148 Miscellaneous Gene Families AT5G20230 39.837 2.40e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1767 - - gmx:100305545 306.99