Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1749 ATGGCGTTGTTCTCTTCTGCCGCAACCGTTCTTCCTCGGAACCTGGCATTCACCAAACTCTCCCTCTCTCACTCTCACACTCTTCTACCGCGCTTCCTTTCTTTCCCAACTCCCAAGTCATCAAACCCTCGCAACCGCGTCGCAGTCTCTCTCCAAACCCCACGCGCTCAATCCGCCGCGTCCGCTTCTCCCTCCGCCTCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAATATCGACACCGACCAGATCATTCCCGCCGAGTACCTCACCCTCGTCCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTCATCGGCCTCCCCGCCACCTACGCCACGCGTTTCATCGAACCCGGCGAGATCAAAACCAAGTACGCCATCGTCATCGGCGGCGCCAACTTCGGTTGCGGCTCCTCCCGCGAGCACGCCCCCGTCGCGCTGGGCGCCTCCGGCGCCGCCGCAGTGGTCGCGGAGTCGTACGCTAGGATCTTCTTTCGGAACTCCGTGGCCACCGGCGAGGTGTATCCGCTGGAGTCGGAGGGACGCCTCTGCGAGGAGTGCACCACCGGCGATGTGGTGACGATTGAGCTCGGAGAGAGCCGCTTGATCAATCACACCACCGGAAAGGAGTATCGCTTGAAACCGATCGGCGACGCGGGTCCAGTGATCGAGGCCGGTGGCATCTTTGCCTATGCCAGGAAAACCGGCATGATTCCCTCTCGTTGA 738 0.6206 MALFSSAATVLPRNLAFTKLSLSHSHTLLPRFLSFPTPKSSNPRNRVAVSLQTPRAQSAASASPSASFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPATYATRFIEPGEIKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1749 245 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 6 244 - -
Gso8g1749 245 Gene3D Aconitase, domain 4 66 241 IPR015928 -
Gso8g1749 245 Pfam Aconitase C-terminal domain 130 176 IPR000573 -
Gso8g1749 245 SUPERFAMILY LeuD/IlvD-like 69 242 - -
Gso8g1749 245 CDD IPMI_Swivel 74 201 IPR033940 -
Gso8g1749 245 PANTHER BNAA05G34440D PROTEIN 6 244 - -
Gso8g1749 245 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 72 238 IPR011827 GO:0016836
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1749 Gso-Chr8 17086477 17089221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1749 K01704 - gmx:100782688 439.884