Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1748 ATGAGCAGGCCAGGAGACTGGAATTGCAGGTCGTGCCAGCACCTGAACTTTCAGAGGAGAGACTCATGCCAGCGATGTGGGGACTCAAAATATGGAGATAGAGTTGTTGATTTTGGTGGTTTTGGAGGAAGAGGAGGGTCCTCATTTGGTTTAACTGGCTCAGATGTTCGCCCCGGCGACTGGTACTGTGCTGCTGCTAACTGTGGTGCACACAACTTTGCTAGCCGCTCAAGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACTTGGCTGGAGGAGGCTATAACAGTTCTGACATCTTGCGCTCCAGAGCTTTTGGTGGCAGTGGAAGACCTGGATGGAAATCTGGTGATTGGATATGCAGCAGATCAGGATGCAATGAGCACAACTTTGCTAGCAGAATGGAATGTTTTAAATGCAGTGCTCCAAGGGACACGTACTAG 441 0.4989 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGRGGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYNSSDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1748 146 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Gso8g1748 146 PANTHER BNAA03G57490D PROTEIN 1 145 - -
Gso8g1748 146 SUPERFAMILY Ran binding protein zinc finger-like 108 144 IPR036443 -
Gso8g1748 146 ProSitePatterns Zinc finger RanBP2-type signature. 118 139 IPR001876 -
Gso8g1748 146 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Gso8g1748 146 SMART zf_4 5 29 IPR001876 -
Gso8g1748 146 SMART zf_4 116 142 IPR001876 -
Gso8g1748 146 SMART zf_4 59 85 IPR001876 -
Gso8g1748 146 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Gso8g1748 146 ProSiteProfiles Zinc finger RanBP2 type profile. 57 88 IPR001876 -
Gso8g1748 146 ProSiteProfiles Zinc finger RanBP2 type profile. 114 145 IPR001876 -
Gso8g1748 146 Gene3D - 110 145 - -
Gso8g1748 146 Gene3D - 2 32 - -
Gso8g1748 146 Gene3D - 52 88 - -
Gso8g1748 146 SUPERFAMILY Ran binding protein zinc finger-like 52 87 IPR036443 -
Gso8g1748 146 ProSitePatterns Zinc finger RanBP2-type signature. 61 82 IPR001876 -
Gso8g1748 146 Pfam Zn-finger in Ran binding protein and others 57 84 IPR001876 -
Gso8g1748 146 Pfam Zn-finger in Ran binding protein and others 114 143 IPR001876 -
Gso8g1748 146 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Gso8g1748 146 PANTHER ZINC FINGER PROTEIN 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1748 Gso-Chr8 17081711 17083633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1748 - - gmx:100527535 298.13