Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1747 ATGGTGAAGGACAAATTAAAGAAACATGTTCTCACTGCTTTCACTCCTAATGGGGATTATGTGGCTATTCTGTCTGCCAATGAGGTGGCCAAGATTTGGAACACAAACACTGGACATTTGTTGGCAGAGTGGAAGCCATCAGATGGAGATCATGATATTCGTTATTCTTGTATTGCATGTAGTTTCATTGGGAAAAAGCGTAGAAAAGAACAGGGAACTTGCTTATTAGCTCTTGGCACAATCGATGGAAGCGTTCTAGCTGTTGATGTTTCCACTGGTGAGAGAAAATTGACTACCAGCCATCCCGGGGGGATTTGTGGACTCTCATTCGCAAACAAGGGACGTCTTCTTCGCATTGTTGGACATAATGGGGTAGCATACGGGGTTAATACTGAAACAGGAGAGCTTTTAAAGGAATTTAAAATCACAAAAAAGTCTATTACTTCTCTGGCTTTCTCGAATGATGAAAAATATTTAGCTATTGTCAGCTCTAGACCACGGGTTATAAGCTGGGAAATTGGGGAAGAGATTCTGAAGTTCCCTAATGATTTGGGAAATGTAGAGCACATTTCTATATCGAGTGATGCCAAAAATTTAGTTACATCAGATTTTGAGGGTAAACATCTTCAAGTTTGGAAGTGTGATTTAAATTCGGGAAATCTGTGTAGAGGTCCTACACTTCCCATAAGACATCCTCCATTAGTTTTGGACTGCCACAGTGGTTGCAATAAAGAAGATGTAGTTGTTTTGGCAGTTACTGGTAGAGGTTCAGCTTATGTATGGAATTTGAGTGCTTCCTCCAAAGATCAGATACAGCCAACTAAATTGACTACGGAGACTAAAATAGTTGAAACAGACAAGGAAAATGGTGTAAGTTCAAAGAAAAGGCACACCTTGATTATTGCATCCAGATTACAACCAGTAGAGGAAAATAAACAGATGAAAGCTCTTGTGACTTATGGATCTGTAGATCATCCACAGTTTAGTATCTTAAATATTAGCAATTCAGGGGAGAATATAGTATTATATGTTGGAGATGAGACTGATTCTGTTCAGCAGCATGACAGTCCTTCTGGCAAAGCAATACCAATGGAAATTAAGAAAGCTAAGAAAAGACAGGCAACATCTGATCCTGATCTTCCAACCACAACTAACGAGGTGGATTTAGCATTTAATGTAGATCAACATGAGGCTGCAGAAGGAGTCCTTCTTGATGATGATTTGAACGAGCCAACAATGGGAGAGAAACTTGCTAGTCTAAGTGTTCTGGATGGGAACAAATCAAGGAGTGATACAGAGCAAGAATCTTCTGTCCCAGCAAAGCCTCCAAGTGCAGACTCTGTACATGTTTTGCTTAAGCAAGCATTAAATGCTGATGATCGCACCCTTCTGCTAGATTGCTTGTTTACACAAGATGAGAAGGTTATTAGAAAGTCAATTGCACAGTTGAACCCATCCAACGTCCTCAAACTTCTATACTCTCTCATATCTATTATTGAATCTAGGGGTTCAATTTTGGTATGTGCTCTTCCATGGTTGAAGTGTCTACTTCTACAGCATGCCAGCGGAATAATGTCCCAGGAATCTTCATTAAAAGCTTTGAACTCTTTGTATCAACTGATTGAGTCTAGAGTCTCCACTTTTAAATCTGCCATCCAACTCTCAAGTTGTTTAGACACGCTTCGCATAGGGTGGTTACTTTTGGAACAGGCTATTGACGAGGAGGAAGATGAAGGTGAAATGGTGCCAGTTATCTATGAGGATAAGGATACTGATGATGATGAAGAATCTGATGATGCCATGGAAGATAACACAGATGAACAACAACCAGAAGAACAGTTTCATGCTGCCAGATACATTGATGCAAATGAAGATATGTGA 1881 0.3993 MVKDKLKKHVLTAFTPNGDYVAILSANEVAKIWNTNTGHLLAEWKPSDGDHDIRYSCIACSFIGKKRRKEQGTCLLALGTIDGSVLAVDVSTGERKLTTSHPGGICGLSFANKGRLLRIVGHNGVAYGVNTETGELLKEFKITKKSITSLAFSNDEKYLAIVSSRPRVISWEIGEEILKFPNDLGNVEHISISSDAKNLVTSDFEGKHLQVWKCDLNSGNLCRGPTLPIRHPPLVLDCHSGCNKEDVVVLAVTGRGSAYVWNLSASSKDQIQPTKLTTETKIVETDKENGVSSKKRHTLIIASRLQPVEENKQMKALVTYGSVDHPQFSILNISNSGENIVLYVGDETDSVQQHDSPSGKAIPMEIKKAKKRQATSDPDLPTTTNEVDLAFNVDQHEAAEGVLLDDDLNEPTMGEKLASLSVLDGNKSRSDTEQESSVPAKPPSADSVHVLLKQALNADDRTLLLDCLFTQDEKVIRKSIAQLNPSNVLKLLYSLISIIESRGSILVCALPWLKCLLLQHASGIMSQESSLKALNSLYQLIESRVSTFKSAIQLSSCLDTLRIGWLLLEQAIDEEEDEGEMVPVIYEDKDTDDDEESDDAMEDNTDEQQPEEQFHAARYIDANEDM* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1747 626 MobiDBLite consensus disorder prediction 579 626 - -
Gso8g1747 626 SUPERFAMILY WD40 repeat-like 13 360 IPR036322 GO:0005515
Gso8g1747 626 PANTHER WD REPEAT-CONTAINING 65 626 - -
Gso8g1747 626 MobiDBLite consensus disorder prediction 608 626 - -
Gso8g1747 626 MobiDBLite consensus disorder prediction 423 441 - -
Gso8g1747 626 MobiDBLite consensus disorder prediction 350 384 - -
Gso8g1747 626 MobiDBLite consensus disorder prediction 579 607 - -
Gso8g1747 626 SMART WD40_4 92 130 IPR001680 GO:0005515
Gso8g1747 626 SMART WD40_4 4 34 IPR001680 GO:0005515
Gso8g1747 626 SMART WD40_4 173 213 IPR001680 GO:0005515
Gso8g1747 626 SMART WD40_4 133 172 IPR001680 GO:0005515
Gso8g1747 626 Gene3D - 11 310 IPR015943 GO:0005515
Gso8g1747 626 MobiDBLite consensus disorder prediction 420 445 - -
Gso8g1747 626 Pfam Dip2/Utp12 Family 460 561 IPR007148 -
Gso8g1747 626 PANTHER OS01G0649000 PROTEIN 65 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1747 Gso-Chr8 17069355 17076066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1747 K14546 - gmx:100796828 1193.72