Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1719 ATGAGCGTGGTGGGATTCGATTTCGGTAACGAGAGTTGCATTGTTGCGGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTCAATGATGAGTCCAAGCGTGAAACGCCCGCCATTGTGTGCTTCGGTGACAAGCAACGCTTCATTGGCACTGCTGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATCTCCCAGTTTAAGAGACTCATTGGTAGGAAATTCTCTGATCCCGAATTGCAGCGGGATCTTAAGTCGTTGCCGTTTCTTGTCACCGAGGGGAGTGATGGGTACCCGTTGATTCATGCGCGGTACATGGGTGAGTCCAAGACGTTTACGCCTACCCAAGTGTTTGGAATGATGCTGTCGAATCTTAAGGAAATTGCGGAGAAGAATCTTACTACAGCGGTTGTGGATTGTTGCATTGGAATCCCGGTTTATTTTACTGATCTGCAGAGAAGGGCGGTGCTGGATGCGGCCACGATTGCTGGTCTGCACCCACTTCGGTTGATTCAGGAAATGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACGGACCTTCCAGAAAACGATCAGCTGAATGTTGCGTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGCTGAAAGTGTTGGCTCATTCATATGATAGGTCTCTCGGCGGTAGGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTGGGAAGTTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTGCATCAGGCTCAGGACTGCCTGTGAGAAGATCAAGAAGATGCTTAGTGCGAATCCTGTGGCGCCTCTCAACATTGAGTGCTTGATGGATGAGAAGGATGTCCGGGGCTTCATCAAGCGAGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTCTGGAGAAGGCACTTGCTGAAGCAGGTCTTACCGTTGAAAATGTACACACAGTTGAGGTGGTTGGTTCAGGTTCTCGGGTACCGGCCATTAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGCTGTGCGTTGGAATGCGCAATTCTTAGTCCAACGTTCAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAGGTTCTGGTCCAGATGCACAGGACAATGGACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCTAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTGCAGGGCAGGAACATTCTCTGTTGATGTATTATATGATGATGCAAGTGGGCTGCAAACACCTGCTAAGATCAGCACATATACTATTGGTCCTTTCCAAACTACAAATGGTGAAAGGGCAAAAGTTAAAGTGAAAGTTCGTCTGAATCTGCACGGAATTGTATCCCTTGAGTCTGCAACACTCCTGGAAGAGGAAAAAGTTGAGGTTCCAGTTACCAAAGAGGCAGCAGGGGAAAATACTAAGATGGACATTGATGAAGTCCCTGCTGAGGCTGCTGCACCTCCCGCCTCCAATGACACTGGTGCTAATATGGAAGGTGCAAAGGCTAGTACTGATGCCTCTGGGGTTGAAAATGGCATCCCTGAGGGTGGAGATAAGCCTTTGCAAAAGGATACTGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGGTGCCTGTGGATGTCCAGAAAGCACTAGAAAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACGAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGATGATTTTACTGCTAAACTTCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAGCTTGAAGAACTCAAAAAGCAAGGTGATCCAATTGATGGGCGTTACGAAGAATTCACGGAGAGGGGTACTATAATTGAACAGTTCGTGTATTGTATAAATAGTTACAGACAAGTTGCAATGTCGAATGATCCTAGATTTGAGCACATTGACATGAACGAGAAACAGAAGGTCATAAATAAATGTGTTGAAGCTGAGAAGTGGTTTAATGAGAAGCAGCAGCAGCAGAGCTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATGAGAAAGAAAGCTGAAGATGTCGATAGGTTCTGCAAGCCGATTATGGCAACACCGAAGCCAACAAAGGCAGTTACTCCAGCAGGACCAGCAACCCCATCTTCTCAGAGTGATGAGCAACAGCAACCCCAGGGGGATTCTGATGTCAACAGTAATGAGAATGCTGGGAATAGCAGTAGTCAGGCTGCACCAGCATCTACCGAACCAATGGAGACTGAAAAGTCTGAGAACACAGGCTCTGCCTAA 2559 0.4572 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQFKRLIGRKFSDPELQRDLKSLPFLVTEGSDGYPLIHARYMGESKTFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIQEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAGKFKEEYKIDVFQNARACIRLRTACEKIKKMLSANPVAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESLPFSISLSWKGSGPDAQDNGPENQQSSLVFPKGNPIPSIKALTFCRAGTFSVDVLYDDASGLQTPAKISTYTIGPFQTTNGERAKVKVKVRLNLHGIVSLESATLLEEEKVEVPVTKEAAGENTKMDIDEVPAEAAAPPASNDTGANMEGAKASTDASGVENGIPEGGDKPLQKDTDTKVQAPKKKVKKTNIPVAELVYGAMVPVDVQKALEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDEYQEFVTASERDDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELKKQGDPIDGRYEEFTERGTIIEQFVYCINSYRQVAMSNDPRFEHIDMNEKQKVINKCVEAEKWFNEKQQQQSSLPKYANPVLLSAEMRKKAEDVDRFCKPIMATPKPTKAVTPAGPATPSSQSDEQQQPQGDSDVNSNENAGNSSSQAAPASTEPMETEKSENTGSA* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1719 852 PRINTS 70kDa heat shock protein signature 2 15 - -
Gso8g1719 852 PRINTS 70kDa heat shock protein signature 30 42 - -
Gso8g1719 852 PRINTS 70kDa heat shock protein signature 140 160 - -
Gso8g1719 852 PRINTS 70kDa heat shock protein signature 332 348 - -
Gso8g1719 852 PRINTS 70kDa heat shock protein signature 363 383 - -
Gso8g1719 852 CDD HSPA4_like_NDB 2 381 - -
Gso8g1719 852 MobiDBLite consensus disorder prediction 799 852 - -
Gso8g1719 852 Gene3D - 38 113 - -
Gso8g1719 852 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gso8g1719 852 Gene3D - 598 707 IPR029048 -
Gso8g1719 852 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Gso8g1719 852 Gene3D - 186 360 - -
Gso8g1719 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 795 IPR029048 -
Gso8g1719 852 MobiDBLite consensus disorder prediction 529 580 - -
Gso8g1719 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 695 IPR029048 -
Gso8g1719 852 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Gso8g1719 852 MobiDBLite consensus disorder prediction 562 578 - -
Gso8g1719 852 MobiDBLite consensus disorder prediction 786 852 - -
Gso8g1719 852 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Gso8g1719 852 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Gso8g1719 852 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gso8g1719 852 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 851 - -
Gso8g1719 852 Gene3D - 5 374 - -
Gso8g1719 852 Gene3D Actin; Chain A, domain 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1719 Gso-Chr8 16784770 16790055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1719 4 666 Calmodulin-binding Proteins AT1G16030 29.235 5.30e-86 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1719 K09489 - gmx:100816539 1637.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0132 15 1158739 1164031 Gso8g1719 8 16784770 16790055 PCT
Gso11g3671 11 52353979 52358681 Gso8g1719 8 16784770 16790055 PCT
Gso8g1719 8 16784770 16790055 Gso15g0132 15 1158739 1164031 PCT
Gso8g1719 8 16784770 16790055 Gso11g3671 11 52353979 52358681 PCT