Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3671 ATGAGCGTGGTTGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTCGCAAGACAAAGGGGGATTGACGTTGTGCTCAACGATGAGTCAAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCCGGGGCTGCTTCTACTATGATGAACCCAAAGAATTCCATCTCACAGATAAAGAGGTTAATTGGTAGACAATTTGCGGATCCGGAATTGCAGCAAGATATCAAGACGTTCCCCTTTGTGGTCACTGAAGGACCTGATGGATATCCTTTAATTCATGCACGGTACTTGGGTGAATCTAGAACATTTACACCTACCCAAGTATTTGGAATGATGTTATCAAACCTTAAAGAAATAGCTGAGAAAAATTTGAATGCTGCTGTTGTTGATTGCTGCATTGGAATTCCACTTTATTTTACTGATCTTCAAAGGAGGGCAGTCTTGGATGCTGCCACTATTGCAGGTTTGCACCCACTTCGTCTGTTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATTTATAAGACTGATCTTCCTGAAAATGATCAGCTGAATGTTGCATTTGTTGATGTTGGACATGCTAGCATGCAAGTATGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAATCATATGATAGGTCCCTAGGTGGTAGGGACTTTGACGAGGTTCTGTTCAACCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATTGATGTTTTCCAAAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCCTGCGAGAAGCTGAAGAAGGTGCTTAGTGCTAATCCGGAGGCCCCTTTGAACATTGAGTGCTTAATGGATGAGAAGGATGTCAGAGGCTTTATCAAGCGTGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGGGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAGGCAGGTCTTACAGTCGAAAATGTGCACATGGTTGAGGTGGTTGGTTCTGGATCTCGTGTACCAGCTATAAACAAAATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAGTGTGCAATTCTCAGTCCAACTTTTAAAGTACGGGAGTTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTCTCGTGGAAAGCTCCAAGTTCTGATGCACAGGAAAGTGGACCAGATAATAAACAAAGTACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTGACCATCTACAGGTCAGGAACCTTTTCTATTGATGTTCAGTATGATGACGTGAGTGGTTTGCAAACACCTGCAAAGATCAGCACATATACTATTGGCCCTTTCCAATCTACAAAAAATGAAAAAGCAAAAGTTAAAGTGAAAGTTCGGTTGAATGTGCATGGAATTATATCTGTCGAATCTGCAACTCTACTGGAAGAGGAAGAAGAAATTGAGGTTCCAGTTTACAAAGAACCTGCAGGAGAAAATTCCAAGATGGAAACTGATGAAGCTCCTGCTGATGCTGCTGCTGCTGCAACTCCTAGCACCAATGACAATGATGTTAGCATGCAAGATGCTAATACCAAGGCAACTGCTAATGCCCCTGGAGCCGAAAATGGTACCCCTGAGGCAGGAGATAAGCCTGTGCAGATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAGAAAGTTAAGAAAATAAACATTCCTGTGGTAGAGTTAGTTTATGGAGCAATGGCAGCCACAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATAGAGTCATGGAGGAAACGAAAGATAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGATTCAGAGAGGGAAGCATTTACTGCTAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGCGTATACATTGCCAAGCTAGAAGAGCTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAATACATGGAGAGGGGTACAGTAATTGATCAACTTGCCTATTGTATAAATAGTTATAGAGAAGCTGCAATGTCAAATGATCCCAAGTTTGATCACATTGACATCAATGAGAAACAAAAGGTCTTAAATGAATGTGTGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACAGCATCAGGACTCGCTTCCAAAATATGCCACCCCTGTACTTTTGTCAGCTGACGTAAGAAAGAAAGCTGAAGCTGTGGACAGGTTTTGTAAGCCAATTATGACGAAACCAAAGCCACTGCCACCCAAGCCAGCTACACCAGAAGCACCAGCAACCCCACCTCCTCAGGGTGGTGAGCAGCAGCAACAACCACCTCAGGAGAATCCTAATGCCAGTACTAATGAAAATGCTGGGGACAATGCTAATCCAGCCCCGCCACCAGCATCTGCTGAACCAATGGAGACTGACAAACCAGAGAACACAGGCTCTGCTTAA 2589 0.4361 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFADPELQQDIKTFPFVVTEGPDGYPLIHARYLGESRTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKAPSSDAQESGPDNKQSTLVFPKGNPIPSVKALTIYRSGTFSIDVQYDDVSGLQTPAKISTYTIGPFQSTKNEKAKVKVKVRLNVHGIISVESATLLEEEEEIEVPVYKEPAGENSKMETDEAPADAAAAATPSTNDNDVSMQDANTKATANAPGAENGTPEAGDKPVQMDTDTKVEAPKKKVKKINIPVVELVYGAMAATDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYMERGTVIDQLAYCINSYREAAMSNDPKFDHIDINEKQKVLNECVEAENWLREKKQHQDSLPKYATPVLLSADVRKKAEAVDRFCKPIMTKPKPLPPKPATPEAPATPPPQGGEQQQQPPQENPNASTNENAGDNANPAPPPASAEPMETDKPENTGSA* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3671 862 Gene3D - 601 710 IPR029048 -
Gso11g3671 862 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 861 - -
Gso11g3671 862 Gene3D - 38 113 - -
Gso11g3671 862 Gene3D - 5 374 - -
Gso11g3671 862 Gene3D Actin; Chain A, domain 4 230 313 - -
Gso11g3671 862 CDD HSPA4_like_NDB 2 381 - -
Gso11g3671 862 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 528 IPR029047 -
Gso11g3671 862 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 603 701 IPR029048 -
Gso11g3671 862 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 634 IPR029047 -
Gso11g3671 862 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 2 15 - -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 30 42 - -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 140 160 - -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 332 348 - -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 363 383 - -
Gso11g3671 862 PRINTS 70kDa heat shock protein signature 477 493 - -
Gso11g3671 862 MobiDBLite consensus disorder prediction 787 862 - -
Gso11g3671 862 MobiDBLite consensus disorder prediction 512 572 - -
Gso11g3671 862 MobiDBLite consensus disorder prediction 793 818 - -
Gso11g3671 862 Gene3D - 186 360 - -
Gso11g3671 862 PANTHER HSC70CB, ISOFORM G-RELATED 1 861 - -
Gso11g3671 862 Coils Coil 687 707 - -
Gso11g3671 862 MobiDBLite consensus disorder prediction 819 838 - -
Gso11g3671 862 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gso11g3671 862 Pfam Hsp70 protein 3 702 IPR013126 GO:0005524|GO:0140662
Gso11g3671 862 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Gso11g3671 862 MobiDBLite consensus disorder prediction 534 557 - -
Gso11g3671 862 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 799 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3671 Gso-Chr11 52353979 52358681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3671 4 401 Calmodulin-binding Proteins AT1G16030 36.908 6.37e-86 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3671 K09489 - gmx:100813658 1584.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0132 15 1158739 1164031 Gso11g3671 11 52353979 52358681 GST
Gso11g3671 11 52353979 52358681 Gso8g1719 8 16784770 16790055 PCT
Gso8g1719 8 16784770 16790055 Gso11g3671 11 52353979 52358681 PCT