Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1715 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGCTTGTCTTACGTGAAGTTTATGAAGACTCGGCTAGAGATCATACAGAAGAAGAAGAAAGCAGAGCAGAAGTTTATGAAGAGTGACATCGCCGAGCTTCTTAGGAGTGGCCTTGACTATGATGCATATATAAGGGCTAAAGGACTTCTGTTGGAGCAAAATATGTTATCCTGCTATGAACTCATTGAAAAGTTTGTTGGATGCTTATCAGATCATGTTGAAGACCTAACTAAGCAGAAGGATTGCCCTGATGAGTGCAAGGAAGCTGTGTCATCATTGATGTATGCTGCTGCAAGATTTGCTGATCTGCCAGAATTGCGTGACCTCAGAACATTATTTACTGAGACATTTGGGAATTCTCTTGAACCATATATAAATAAAGAGTTTGTTGAGAAGCTGAGGCAAGATCCGCCTACGAGAGAAATGAAGATTGGACTATTATATGATATAGCACAAGAGTTCTCTGTAGAGTGGGACGACAATGCTCTGAGACAAAGACTTTATACAGAATCGTCATTATGTGAAGAGAGGCCTAATCCCAGGAGAGACTTGATCACATCCAAAGGAAAAGAAAGAGACACAGACACCCTACCTCTTGGAAGGAAAGATTTCAATGATGTCTCATTGATACACCAAAATAGTAGTGATGATGAAACAAGTACAGAACTGTCATCCCATGATGGCAGAAAGGGTAGTAGTTCAAATTCATTGGGAAGCTTTTCTGAGGATGAAGTAGAAACTAAGAGGCCAATTTCTTCCTATTTGCTCATTCCACCCCCATACCTCAAACAAAAGACCAACACAGGTGAAAGCAATTCAAAGAGAACAACACATTCTGAGGCTGCAGGCAAAGGAAAACGTTATCCTTCTCAACAACAAGAACATGATACTGGCGAAAACAGAAGGCTTAGAACATCACATGTCAGATGA 969 0.4056 MFRWLLKPRFYSKCLSYVKFMKTRLEIIQKKKKAEQKFMKSDIAELLRSGLDYDAYIRAKGLLLEQNMLSCYELIEKFVGCLSDHVEDLTKQKDCPDECKEAVSSLMYAAARFADLPELRDLRTLFTETFGNSLEPYINKEFVEKLRQDPPTREMKIGLLYDIAQEFSVEWDDNALRQRLYTESSLCEERPNPRRDLITSKGKERDTDTLPLGRKDFNDVSLIHQNSSDDETSTELSSHDGRKGSSSNSLGSFSEDEVETKRPISSYLLIPPPYLKQKTNTGESNSKRTTHSEAAGKGKRYPSQQQEHDTGENRRLRTSHVR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1715 322 MobiDBLite consensus disorder prediction 239 254 - -
Gso8g1715 322 MobiDBLite consensus disorder prediction 302 322 - -
Gso8g1715 322 PANTHER IST1 FAMILY MEMBER 9 300 IPR005061 GO:0015031
Gso8g1715 322 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 9 300 - -
Gso8g1715 322 MobiDBLite consensus disorder prediction 188 213 - -
Gso8g1715 322 MobiDBLite consensus disorder prediction 187 322 - -
Gso8g1715 322 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Gso8g1715 322 Gene3D - 6 177 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1715 Gso-Chr8 16753777 16756504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1715 - - gmx:100792068 634.795