Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1710 ATGAACATGCCGCCGAAGCCGAACCAGGTGGCTGTGAGAGACCTCGTCGAGGAAGCTAAGAAACGGATCGTCATCCTCGTCATATGCGTCGTAGGACTCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTAATTATTATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCCACCAATGTTCAGTCTTCAAAGAAGCCTGTTGAAAATCATAAAGTTATTGCAAAGTTTGAGTGGAGAACAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATCGATAAGTTCACCAGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGCTTAACACCAGACAAAGAGGGTCCCGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCCGGACGCATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTATTAATCTCATTTGCACACATTTGGAGCTGTTTCGTGCTGCCCACTCAAAGATTGAAAAGCAACATACAGGTTCATTAACAATCGAAAGTCAAGACATGGAACTAAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCTTTATTTTCTGCAGAAGCCGAGCATAAGGTTTTGCAGCATCTGATGACAGGTCTTATGCATGTTACTTTCAAGTCTGAGGATTTACAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGGCCTGTCCTAAACTTAGCAAATCCAAGATTTGTTAATGAAAGAATTGAATCTGTGGTAGTTAACAAGACCAAGGTTAACAAGGGGGTTCCTGCAGCTCAAGAGGCATCTCACACTAAACCAGATGAGATACAAATCTCATCTGATGATTTCTCCAAGACTTCAGATCCTTCTGTTACTGGTGTTGAGCTTGTGCAGCTAAGGAATGGTCCATCTAAAAATGCAGAGCCATGTGCTAAAAATAATGCCCGTGATAATATTACTAAAGATCCGTTGCTTTCAATTGATGCTCGACCTTCCCGTACATGGAACTCATTGCCTGCAAACTCCCAAGCTAATGATGACCAAGGCCTTCAACAACATCGCTCAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGAAAGACCCAAGCTCTTGCTCCAGAAAATTTTGAGAATATGTGGACTAAAGGCAAAAATTACAAGAAAAAGGATGGTGAGAACCAGTCAAATGAGCATGTTTCGCAGCATCCTGTGGTAGGGAAACTGCCGAAGGTAGATCATATGAAAGCAATATCTGGACCAAAAGAAAGAGATAGTAATTCCAAGCTTATTCTTCCCCCTAAGAGACGCCACATTAATTCTGGACACAGCAGTCAATTCTCTGTAGAAAATACATCCATTAATGTAGACAAGAATGGATCAACTTCAGTTACCTCATACAAAGACGATGAGTCAGTTGCCTCTTTTAAAGATGATGAGCACAGCCACATTTATGGGCAGATGAGTGATTCAGAGAGCAGTACTTCTTATACCTCTGAAGATAACGAAAGTAGTACAGTCACTGGTCTTGATTCCCCTGTCACTAAGGTTTGGGATGGAAAAAGTAATAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATTTTGACCATCACGGTGCAAAGAAAAAGAACAAGAGCCATTCTCGGTATCCAAGATTATCCAGAGCCCAATCTGGCAGTCAAGGGTCTTGGCCTGGTGGTCATAAAACACAAACGTGGCAGGAAGTTGAGAGAACAAGCTTTTTATCTGGAGATGGTCAAGACATACTTAATTCTTCAAAATCACATATAAATTCTGAGGAGTCCAGTGATGATGGTGATATGGAAAGTTTGGGTAGACTTTATAGTGGAGCAGCTGCCTCCTCTTCTGCCTACTCTATTTCTATATCAGATTCTTGTAGTTTGTCTGTTGATCCCCTGAAAAGTTCCTCTGCCGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCAAAAACCTTTGCTGTTTACTCCATATCCGTTACAGATGTAAATAACAACAGTTGGTCGATTAAAAGAAGGTTTCGCCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCAACTGGTTTAGATGTACCAGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTCATGCAACTACCAACAGTTTCGGAATCAATTGAAGTATGGGACTTTCTCAGTGTTGATTCTCAGACGTACATATTCTCAAATTCTTTTTCTATCATGGAAACATTATCAGTTGGCTTGAATGCCAAACCATTTCAGAAGACTAAAAACACTTCGAACTTCTCTGCACCTGCAAGTGATCCTGTTTCCTTTCAGAGAGAAAACTGCAGTGCTGAAAGTAAAGAGGCTGTTTTGGGAGCAAGAACTAATGTTGAGGCCAATGGATTGAGGTCAAAAGTAAACAGCACACCTCTTTCTCTGCCAAAAAAGAGTACACATGAACCTAGAAAGTCATTTGACAATTCTAGCAGCAATACAGACATTCAAGCACAGAAGAGTGCACCTTCTCCCAATAACTTGCAGAAGACAGCGAAAGAAAGAGATAATTCAGATCAAGTTTCTGAAGTGCACCATGATGCTTCCGATGCTTTTCCAACAGAGTGGGTGCCACCAAATTTGAGTGTACCCATTTTGGATCTGGTTGATGTTATCTTCCAGGTTCATGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAACAAATCTTACAACTAGGAATGGGTGATGCCTTTGATGACTGGTTGATAGAGAAAATTCAGCTTCTCCGTAAGGGTTCAGTGGTTGCTTCAGGGGTCAAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAATCGACGACCTCCGTCACCTTCTAGTCCATCTCAGAATTCTCCTCATGGCAATCAACCTACACAAGTGTCTTCTCCAAGGTTGGATGATGAGCAGAAACAGGAGGCAGATCGGCGTGCAAAATTTGTATATGAGCTAATGATTGATCATGCACCGCCAGCTATTGTAGGTCTTGTTGGTCGGAAGGAGTACGAGCAATGTGCAAGGGATTTATATTTTTTCCTTCAGTCATCCGTTATCTTGAAGCAGCTGGCTTTTGACATCCTGGAGCTGCTGCTGACATCAGCATTTCCGGAGCTTGATAATGTATTTAAGCAGCTGCATGAAGAAAAGCATAAATTTGGTGAGTTCAGAACACAGTAA 3426 0.4136 MNMPPKPNQVAVRDLVEEAKKRIVILVICVVGLSYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSTNVQSSKKPVENHKVIAKFEWRTKVNSPVVEDAIDKFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLINLICTHLELFRAAHSKIEKQHTGSLTIESQDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMHVTFKSEDLQCSFFRYTVRELLACAVIRPVLNLANPRFVNERIESVVVNKTKVNKGVPAAQEASHTKPDEIQISSDDFSKTSDPSVTGVELVQLRNGPSKNAEPCAKNNARDNITKDPLLSIDARPSRTWNSLPANSQANDDQGLQQHRSGEWGDILDVISRRKTQALAPENFENMWTKGKNYKKKDGENQSNEHVSQHPVVGKLPKVDHMKAISGPKERDSNSKLILPPKRRHINSGHSSQFSVENTSINVDKNGSTSVTSYKDDESVASFKDDEHSHIYGQMSDSESSTSYTSEDNESSTVTGLDSPVTKVWDGKSNRNQAVSYVHHPLENFDHHGAKKKNKSHSRYPRLSRAQSGSQGSWPGGHKTQTWQEVERTSFLSGDGQDILNSSKSHINSEESSDDGDMESLGRLYSGAAASSSAYSISISDSCSLSVDPLKSSSAVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSVGLNAKPFQKTKNTSNFSAPASDPVSFQRENCSAESKEAVLGARTNVEANGLRSKVNSTPLSLPKKSTHEPRKSFDNSSSNTDIQAQKSAPSPNNLQKTAKERDNSDQVSEVHHDASDAFPTEWVPPNLSVPILDLVDVIFQVHDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEKIQLLRKGSVVASGVKRVEQILWPDGIFITKHPNRRPPSPSSPSQNSPHGNQPTQVSSPRLDDEQKQEADRRAKFVYELMIDHAPPAIVGLVGRKEYEQCARDLYFFLQSSVILKQLAFDILELLLTSAFPELDNVFKQLHEEKHKFGEFRTQ* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1710 1141 SMART PXA_3 111 290 IPR003114 -
Gso8g1710 1141 Pfam PX domain 719 796 IPR001683 GO:0035091
Gso8g1710 1141 Gene3D - 688 804 IPR036871 GO:0035091
Gso8g1710 1141 PANTHER PX SERINE/THREONINE KINASE PXK 8 1138 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 522 556 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 589 610 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 1033 1048 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 506 521 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 913 931 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 864 933 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 295 389 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 471 556 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 887 912 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 474 505 - -
Gso8g1710 1141 Pfam PXA domain 107 284 IPR003114 -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 864 878 - -
Gso8g1710 1141 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 8 1138 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 364 386 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 316 333 - -
Gso8g1710 1141 SUPERFAMILY PX domain 689 797 IPR036871 GO:0035091
Gso8g1710 1141 MobiDBLite consensus disorder prediction 569 610 - -
Gso8g1710 1141 CDD PX_SNX19_like_plant 690 794 - -
Gso8g1710 1141 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 622 648 - -
Gso8g1710 1141 MobiDBLite consensus disorder prediction 1017 1053 - -
Gso8g1710 1141 SMART PX_2 692 796 IPR001683 GO:0035091
Gso8g1710 1141 Pfam Sorting nexin C terminal 961 1099 IPR013937 -
Gso8g1710 1141 ProSiteProfiles PX domain profile. 688 800 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1710 Gso-Chr8 16700666 16706511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1710 K17925 - gmx:100790491 2198.32