Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1699 ATGGAGAAGATGAAAATAGAAGAGGTTCAATCAACCACGAAGAAACAGCGTGTTGCTACACACACTCACATTAAAGGCCTAGGTCTCGAGGCGAGTGGAAAAGCATTGAGTTTTGCTGCTGGGTTCGTTGGACAAGTTGAGGCAAGAGAAGCATCAGGTCTTGTGGTGGACATGATACGGCAGAAGAAGATGGCCGGCCGGGCACTTCTTCTCGCCGGACCGCCCGGGACCGGCAAGACGGCATTGGCACTTGGAATAAGCCAGGAGCTTGGCACCAAGGTACCGTTCTGCCCTATGGTTGGCTCCGAAGTTTACTCCTCGGAAGTAAAGAAGACTGAGGTTCTCATGGAAAATTTTCGACGGGCCATTGGTCTGCGTATCAAGGAAAACAAGGAAGTATACGAAGGGGAGGTCACCGAGCTCTCTCCAGAAGAAACTGAGAGCGTAACAGGTGGTTATGGTAAAAGTATTAGCCATGTCATCATTGGATTGAAGACAGTGAAAGGAACAAAGCAACTCAAGTTGGATCCTACCATATATGATGCCTTGATTAAGGAAAAGATAGCTGTTGGCGATGTTATATACATTGAGGCAAATAGCGGGGCTGTAAAAAGGGTGGGTCGAAGTGATGCTTTCGCTACAGAGTTTGACCTTGAAGCTGAAGAGTATGTTCCACTGCCTAAGGGAGAGGTTCACAAAAAAAAGGAGATTGTTCAGGATGTTACCCTACATGATCTGGATGCTGCCAATGCACGACCTCAAGGGGGACAAGATATTCTGTCTCTGATGGGTCAGATGATGAAGCCCAGGAAAACAGAAATCACTGACAAGTTGAGGCAAGAGATTAACAAGGTTGTTAACCGATATATTGATGAAGGTGTAGCAGAGCTTGTTCCTGGAGTTCTATTCATTGATGAGGTTCATATGCTAGATATGGAGTGTTTTTCGTATTTGAATCGTGCTTTAGAGAGCTCCCTATCTCCAATAGTAATCTTTGCTACTAATAGAGGAATATGCAATGTAAGAGGAACTGATATGACAAGTCCTCATGGCATACCTGTTGACCTGTTGGATCGGTTGGTGATCATTCGAACGCAAACATATGGTCCTGCTGAAATGATACAGATTCTAGCTATCCGTGCTCAAGTAGAGGAACTGGTTGTGGATGAAGAAAGTTTAGCTTTCCTTGGGGAGATTGGACAACAAACATCTTTAAGGCATGCAGTTCAACTGTTATCACCTGCCAGCATTGTTGCAAAAATGAATGGCCGAGACAACATCTGCAAGGCGGATCTTGAGGAAGTTTGTACGCTATATTTGGATGCCAAATCATCGGCCAGGTTACTTCAAGAGCAGCAGGAGAAATACATTTCATAA 1377 0.4503 MEKMKIEEVQSTTKKQRVATHTHIKGLGLEASGKALSFAAGFVGQVEAREASGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKIAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQQTSLRHAVQLLSPASIVAKMNGRDNICKADLEEVCTLYLDAKSSARLLQEQQEKYIS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1699 458 Pfam TIP49 P-loop domain 17 368 IPR010339 GO:0005524
Gso8g1699 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 437 IPR027417 -
Gso8g1699 458 SMART AAA_5 65 367 IPR003593 -
Gso8g1699 458 CDD AAA 66 133 - -
Gso8g1699 458 Gene3D - 368 458 - -
Gso8g1699 458 Gene3D - 13 365 IPR027417 -
Gso8g1699 458 PANTHER RUVB-RELATED REPTIN AND PONTIN 3 458 IPR027238 GO:0008094
Gso8g1699 458 Gene3D - 122 247 IPR042487 -
Gso8g1699 458 Pfam TIP49 AAA-lid domain 376 441 IPR041048 -
Gso8g1699 458 PANTHER RUVB-LIKE HELICASE 3 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1699 Gso-Chr8 16623689 16627561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1699 K04499 - gmx:100809596 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0161 7 1513324 1517440 Gso8g1699 8 16623689 16627561 GST