Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1581 ATGGCATCTCAAGGTTTGTGTCCTTCGATAAAAAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGACCTGCATTTCTTTGTCACTGGTGGTGAAGATGAAAATGAGCTCATTCTAGCATCAGTTCTTCAAGGTTTCTTTGATGCAGTCACCCTTCTGTTGAGGAGTAATGTTGACAAAAGAGAGGCACTTGAGAACTTAGATCTCATTCTCCTGTGTCTTGACGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGACCTCTTATTGCCGAAAAGGTGACCTCTCATAGCTTGGATGCTGATGCCCCCTTGTCAGAGCAGACACTAACTCAAGCTTGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 543 0.4052 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1581 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 5 180 - -
Gso8g1581 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Gso8g1581 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Gso8g1581 180 CDD Zeta-COP 11 146 - -
Gso8g1581 180 Gene3D - 4 150 - -
Gso8g1581 180 PANTHER ZETA-COAT PROTEIN 5 180 IPR039652 GO:0006890|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1581 Gso-Chr8 15439013 15442361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1581 K20472 - gmx:100775726 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0066 7 586148 589619 Gso8g1581 8 15439013 15442361 GST