Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0869 ATGGCGTGCAGGGGTATGCTTCGTTCCACCATTCTCATAGAACCCACCCTACTCCGTTCTTTAAATTTCAATTCTAACAAACATCACATAGCTTCACTCAACCAATGGTCTTGCCGGTTTCATTCTCCAAAACCCCCTTATTCTTCCTCTCAGAACGAAACGCCGTTGTCTCAGGACCCTGTCTTGAAGGCCATTTCAGAGATTTCCAAAGGCGAAGGGAGGGTTGGCCAAACAACAAACGTAATTATTGGAAGCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTGAGGATTTTGTGCAAGCCATGGTTGTTGCTGTCGAATCTGTAATCCAACAACCAATTCCTCAGGGATATGTGAAGCAAAAGTTATCGTCGGGGGGCAAATATGTATCTGTAAATATTGGGCCCATTCAAGTTGTTTCTAGTGAACAGGTCCAAGCTGTATATAATGCCATGAGGACAGACAACCGGGTGAAATATTTTTTATAA 558 0.4462 MACRGMLRSTILIEPTLLRSLNFNSNKHHIASLNQWSCRFHSPKPPYSSSQNETPLSQDPVLKAISEISKGEGRVGQTTNVIIGSTAADDSNNEWLALDQKVNSYPTDRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGYVKQKLSSGGKYVSVNIGPIQVVSSEQVQAVYNAMRTDNRVKYFL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0869 185 SUPERFAMILY YbeD/HP0495-like 99 185 IPR027471 -
Gso8g0869 185 Pfam Protein of unknown function (DUF493) 102 185 IPR007454 -
Gso8g0869 185 Gene3D - 99 185 - -
Gso8g0869 185 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 21 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0869 Gso-Chr8 8088264 8091398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0869 - - gmx:100819554 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0052 18 458314 461842 Gso8g0869 8 8088264 8091398 PCT
Gso13g1569 13 31016274 31019844 Gso8g0869 8 8088264 8091398 PCT
Gso8g0869 8 8088264 8091398 Gso18g0052 18 458314 461842 PCT
Gso8g0869 8 8088264 8091398 Gso13g1569 13 31016274 31019844 PCT