Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1998 ATGAATATGAAAATGAATGTTATTCTGTGCCTCCAGTTCCTATGTTTCTTTCTTTTGAGTACTTGGTTCATTAAATCATCTGCAATAAATGTGGAAACATATGAATCTGATAGAATAATTGATCTTCCTGGCCAACCTTCAAGCCCCTCAGTCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGGAGGGAACTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCCTCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTGTTGGGTATGGCGCAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACATACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGGTTTTCTTATACTAACACATCTTCTGATCTCACCATATTAGAGGATAATTTTGTGGCTAAGGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTATGGTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAATAAAGATGGGAGCAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGGAACCCAAAGACTGATGATTACTATGACTATAAAGGCCTTCTGGAATATGCATGGAGCCACGCGGTTATATCAGACCAGCAATACGACAAAGCAAAACAATTATGTGATTTTAAACAATTTGAATGGTCTAATGAATGCAACAAGGCCATGAATGAAGTGTTCCAAGATTACTTAGAAATTGACATATACAACATTTATGCCCCGGCATGTCTTCTAAACAGCACATCCTCAATAGCTGATGATGGCGACAGTAACGGCCCTGAATCATTAACTAAGGAGAGAAATGATTATAGACTAAAGAGGATGAGAATTTTTGGGGGCTATGATCCTTGTTATTCCAATTATGCAGAAGAATACTTCAATAGAAAAGATGTTCAGTCATCTTTTCATGCAGATACTAAAAGAGACACTAACGTAGCATGGAAGGTGTGCAATAATTCCATATTGCGGACTTACAACTTCTCTGTTTTCTCGGTCCTACCTGTCTACACTAAACTCATCAAAGGTGGCCTTAAGATTTGGATTTACAGTGGAGATGCAGATGGAAGAATACCGGTGATAGGGACACGATATTGCGTTGAGGCTCTGGGATTACCTCTCAAGTCTAGGTGGCGAACTTGGTACCATGATAATCAGGTTGGAGGAAGAATAGTTGAATACGAAGGTCTGACATATGTGACAGTGAGAGGAGCAGGTCACTTGGTGCCACTGAACAAGCCCAGTGAGGCTCTCTCTCTAATTCATTCTTTCTTAACAGAAGAACATCTTCCTACTCGTGGATAA 1446 0.4011 MNMKMNVILCLQFLCFFLLSTWFIKSSAINVETYESDRIIDLPGQPSSPSVSHFSGYITVNENHGRELFYWFFEAQSEPSKKPLLLWLNGGPGCSSVGYGAVVEIGPLIVNKNGEGLHFNTYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDNFVAKDAYNFLVNWLQRFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDGSKYPFINLKGFIVGNPKTDDYYDYKGLLEYAWSHAVISDQQYDKAKQLCDFKQFEWSNECNKAMNEVFQDYLEIDIYNIYAPACLLNSTSSIADDGDSNGPESLTKERNDYRLKRMRIFGGYDPCYSNYAEEYFNRKDVQSSFHADTKRDTNVAWKVCNNSILRTYNFSVFSVLPVYTKLIKGGLKIWIYSGDADGRIPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTEEHLPTRG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1998 481 Gene3D - 332 369 - -
Gso7g1998 481 Gene3D - 380 473 - -
Gso7g1998 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 479 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Gso7g1998 481 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 13 479 - -
Gso7g1998 481 Pfam Serine carboxypeptidase 43 473 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Gso7g1998 481 SUPERFAMILY alpha/beta-Hydrolases 39 475 IPR029058 -
Gso7g1998 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Gso7g1998 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1998 Gso-Chr7 44032666 44036582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1998 333 477 Calmodulin-binding Proteins AT2G22960 26.712 5.01e-13 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1998 7 44032666 44036582 Gso17g0305 17 2701763 2705417 GST