Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0305 ATGAATATGAAAATGAATGTTATTCTGTGCCTCCAGTTCCTATGTTTCTTTCTTTTAAGTACTTTGTTCATTAAAGCATCTGCAATAAATGTGGAAACATATGAATCTGATAGAATAATTGATCTTCCTGGCCAACCTTCAAGCCCATCAGTCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCATCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGGAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACACACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCACCTGTGGGAGTTGGATTTTCTTATACTAATACATCTTCTGATCTCACCAAATTAGAGGATAATTTTGTGGCTGAGGATGCCTACATTTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTATGGTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAAAGATGGGAGCAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGGAACCCAGAAACTGATGATTACTATGACTATAAAGGCCTTCTTGAATATGCATGGAGCCATGCGGTTATATCAGACCAGCAATACGACAAAGCAAAACAAGTATGTGATTTTAAACAATTTGATTGGTCAAATGAATGCAACAAGGCCATGAACGAAGTCTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGTCATGTCTTCTAAACAGCACATCCTCAATAGCTGATGATAGCAACGGTAACGGCCCTGAATCATTTACTAAGGAGAGAAATGATTATAGACTAAAGAGGATGAGAATTTTTGGGGGCTATGACCCTTGTTATTCCAATTATGTAGAAGAATACTTCAATAGAAAAGATGTTCAGTCATCTTTTCATGCAGATACTAAAAGAGACACTAACGTAGCATGGAAGGTTTGCAATGGAGACGCAGATGGAAGAGTGCCGGTGATAGGAACACGATATTGCGTTGAGGCTCTGGGATTACCTTTAAAGTCTAGGTGGCGAACTTGGTACCATGATAATCAGGTTGGAGGAAGGATAGTTGAATATGAAGGGTTGACATATGTGACAGTGAGAGGAGCAGGTCACTTGGTGCCACTGAACAAGCCTAGTGAAGCTCTCTCTCTAATTCATTCTTTCTTAACTGGGCAACATCTTCCTACTACTCATGGATAA 1353 0.3976 MNMKMNVILCLQFLCFFLLSTLFIKASAINVETYESDRIIDLPGQPSSPSVSHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGGVVEIGPLIVNKNGEGLHFNTHSWNQEANLLFVESPVGVGFSYTNTSSDLTKLEDNFVAEDAYIFLVNWLQRFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDGSKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQFDWSNECNKAMNEVFQDYSEIDIYNIYAPSCLLNSTSSIADDSNGNGPESFTKERNDYRLKRMRIFGGYDPCYSNYVEEYFNRKDVQSSFHADTKRDTNVAWKVCNGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGQHLPTTHG* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0305 450 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 367 447 - -
Gso17g0305 450 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 13 366 - -
Gso17g0305 450 ProSitePatterns Serine carboxypeptidases, histidine active site. 412 429 IPR033124 GO:0004185
Gso17g0305 450 Gene3D alpha/beta hydrolase 305 445 IPR029058 -
Gso17g0305 450 SUPERFAMILY alpha/beta-Hydrolases 35 446 IPR029058 -
Gso17g0305 450 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Gso17g0305 450 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Gso17g0305 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 366 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 367 447 IPR001563 GO:0004185|GO:0006508
Gso17g0305 450 Pfam Serine carboxypeptidase 43 366 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0305 Gso-Chr17 2701763 2705417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0305 364 445 Calmodulin-binding Proteins AT2G22960 32.530 2.14e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0305 K16297 - gmx:100815141 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0305 17 2701763 2705417 Gso17g0305 17 2701763 2705417 ECH
Gso7g1998 7 44032666 44036582 Gso17g0305 17 2701763 2705417 GST