Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1038 ATGGCTTCCAAACCTGGCATACTAACCAACTGGCCATGGAAACCTCTCGGGTGTTTCAAGTGGGTGATTTTGACACCATGGATTGCACACAGCACTTACTCTTTCCTAGTGAGTGATACAAAGGAGAGGGACCTTGGTTACTTCCTCATCTTCCCTTATATGATGGTGAGGATGCTGCATGACCAAGTTTGGATCACACTCTCTCGCCATCGAACTGCCAAAGGCAAAAACAGAATTGTTGACAAGGGCATTGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGACCAGATCTTGTTCAATGGGATCATATTTTATATAGGTTATATGTTAGTTCCAGAGAGTTCTCACATGCCCTTGTGGAGAACAGATGGTGTACTTATCACTGCTCTTTTACATGCTGGACCAGTGGAGTTTCTTTATTACTGGTTACATAGGGCACTTCATCACCACTTCCTCTACTCCCGCTATCATTCTCATCACCATTCTTCCATTGTCACAGAACCCATTACTTCTGTGATCCATCCTTTTGCTGAGCACATAGCCTACTTTGTGTTATTTGCCATTCCATTATACACAACTGTGGTTGCCAGAACAGCTTCTATAGCATCATATGCTGGTTATCTCGCATACATTGACTTCATGAACAATTTGGGTCACTGCAATTTCGAGTGCATCCCAAAGGCCATTTTCACAGCATTTCCCTTCCTAAAATATCTCATGTATACACCATCGTTCCATTCACTGCATCATACCCAGTTTCGGACAAATTACTCACTCTTCATGCCTATTTATGATTACATTTATGGTACCATGGACAAGACTACAGACACAACATATGAGATAGCATTAAAGAGAGAAGAAAGTTCACCCGATGTCGTACATCTAACACACCTTACAACCCCAGAGTCCATCTATCATCTAAGGTTGGGATTTGCTTCCTTAGCCTCTAGACCTCAATCTTCTACTTGGTACCTCTCCTTGATGTGGCCTTTAACACTTTGGTCTATTCTCGTGACTTGGTTTTATGGTCAAACATTTGTTATGGAGAGGAATGCTTTCAAAATGCTCAATTTACAATCATGGGTTATACCAAGATTCCATGTACAAGGAGATTCATTCAATAAATATGGTGAACTTTACATCAAAAGATATCCCGAGCTTAAGATAAAAATTGTGGATGGCAGTAGCTTAGTCGTAGCTATTGTTGTTAACAGTATTCCTAAAGAAGCAAGCCAAGTGCTTCTTTGTGGCAAACCTAATAAGGTTTCATATGCCATTGCGAGTGCTTTATGTGAAAGGGGTACTAAGGTTACCACTATGTATAAGGACGAATATGACAAACTTCAATTAAGGATCTCCAATGAGTCCAAAAAGAACCTGGTTTTTCCAGGATCCTATACTGCTAAGATATGGTTAGTAGGAGATCAGTGTGATGAGGTCGAACAAAAAAAGGCACCAAAAGGATCATTGTTCATACCTATTTCCCAATTCCCTCCGAAGAAACTTCGCAAAGACTGCTTCTACCATAGCACACCAGCCATGATAGCTCCCCCTTCTTTAGTGAATGTGGACTCTTGTGAGAACTGGCTGCCAAGAAGAGTGATGAGTGCATGGCGTGTGGCTGGAATATTGCATGCCTTAGAATGTTGGAAGGTCAATGAGTGCGGAAATGTCATGTTTAGCGTTGAGAAAATATGGCAAGCAAGTCTTCAGCATGGGTTTAGGCCATTGAAGATTACCCTTTATTCATTTCTAAATTAA 1767 0.4109 MASKPGILTNWPWKPLGCFKWVILTPWIAHSTYSFLVSDTKERDLGYFLIFPYMMVRMLHDQVWITLSRHRTAKGKNRIVDKGIEFEQVDRESNWDDQILFNGIIFYIGYMLVPESSHMPLWRTDGVLITALLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTVVARTASIASYAGYLAYIDFMNNLGHCNFECIPKAIFTAFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKTTDTTYEIALKREESSPDVVHLTHLTTPESIYHLRLGFASLASRPQSSTWYLSLMWPLTLWSILVTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQGDSFNKYGELYIKRYPELKIKIVDGSSLVVAIVVNSIPKEASQVLLCGKPNKVSYAIASALCERGTKVTTMYKDEYDKLQLRISNESKKNLVFPGSYTAKIWLVGDQCDEVEQKKAPKGSLFIPISQFPPKKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPRRVMSAWRVAGILHALECWKVNECGNVMFSVEKIWQASLQHGFRPLKITLYSFLN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1038 588 Pfam WAX2 C-terminal domain 415 578 IPR021940 -
Gso7g1038 588 Pfam Fatty acid hydroxylase 138 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gso7g1038 588 PANTHER STEROL DESATURASE 1 371 - -
Gso7g1038 588 PANTHER STEROL DESATURASE 372 581 - -
Gso7g1038 588 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 372 581 - -
Gso7g1038 588 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1038 Gso-Chr7 14186162 14205099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1038 1 579 Lipid Metabolism Gene Families AT1G02190 53.623 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1038 K15404 - gmx:100790115 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1038 7 14186162 14205099 Gso7g1038 7 14186162 14205099 ECH
Gso7g1038 7 14186162 14205099 Gso3g0865 3 31155073 31172791 GST