LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1035	ATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGA	624	0.4006	MGTVEAANKDANGSLLEKNPSVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFETVKAIFGPKNDKAD*	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1035	207	PRINTS	Adenylate kinase signature	24	37	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PRINTS	Adenylate kinase signature	52	66	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PRINTS	Adenylate kinase signature	100	116	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PRINTS	Adenylate kinase signature	147	162	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PRINTS	Adenylate kinase signature	164	178	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	ProSitePatterns	Adenylate kinase signature.	100	111	IPR033690	-
	Gso7g1035	207	Hamap	Adenylate kinase [adk].	21	200	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	Hamap	UMP-CMP kinase [CMPK1].	20	202	IPR006266	GO:0004127\|GO:0006207\|GO:0006221\|GO:0009041
	Gso7g1035	207	Pfam	Adenylate kinase	25	177	-	-
	Gso7g1035	207	TIGRFAM	UMP_CMP_kin_fam: UMP-CMP kinase family	22	199	IPR006266	GO:0004127\|GO:0006207\|GO:0006221\|GO:0009041
	Gso7g1035	207	CDD	ADK	22	191	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PANTHER	NUCLEOTIDE KINASE	4	204	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Gso7g1035	207	PANTHER	UMP-CMP KINASE	4	204	-	-
	Gso7g1035	207	Gene3D	-	8	199	IPR027417	-
	Gso7g1035	207	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	21	199	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1035	Gso-Chr7	14072825	14079276	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1035	K13800		-	gmx:100306603	411.764

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g1035	7	14072825	14079276	Gso3g0869	3	31397710	31402652	GST