Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0987 ATGGCCGAGCAAACCTTCATCATGATCAAGCCAGATGGCGTTCAAAGAGGCCTTATTGGCGAGATTATTAGCAGATTTGAGAGGAAGGGTTTTTACTTGAAAGGGTTGAAACTCGTTACTGTGGACCGTCCTTTTGCTGAGAAGCACTATGCTGATTTGTCTGCAAAGCCTTTCTTTAGTGGTTTGGTGGATTACATTGTCTCTGGCCCTGTTGTTGCCATGATCTGGGAGGGTAAGAATGTTGTTACAACTGGCCGAAAGATTATCGGAGCCACAAACCCAGCTCAATCTGAGCCTGGAACTATTCGTGGTGACTTTGCTATTGACATTGGAAGGAATGTTATCCATGGAAGTGATTCAGTTGAGAGTGCTAACAAGGAAATTGCATTGTGGTTCCCTGAGGGCCCTGCTAACTGGCAAAGCTCCCAGCACTCTTGGATCTATGAGTAA 450 0.4556 MAEQTFIMIKPDGVQRGLIGEIISRFERKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIVSGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDSVESANKEIALWFPEGPANWQSSQHSWIYE* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0987 149 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 3 149 - -
Gso7g0987 149 Pfam Nucleoside diphosphate kinase 3 134 IPR034907 -
Gso7g0987 149 PRINTS Nucleoside diphosphate kinase signature 5 27 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 PRINTS Nucleoside diphosphate kinase signature 49 68 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 PRINTS Nucleoside diphosphate kinase signature 69 86 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 PRINTS Nucleoside diphosphate kinase signature 90 106 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 PRINTS Nucleoside diphosphate kinase signature 113 132 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 SMART ndk_5 2 139 IPR034907 -
Gso7g0987 149 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 3 149 - -
Gso7g0987 149 SUPERFAMILY Nucleoside diphosphate kinase, NDK 2 148 IPR036850 -
Gso7g0987 149 Gene3D - 1 149 IPR036850 -
Gso7g0987 149 CDD NDPk_I 3 132 - -
Gso7g0987 149 Hamap Nucleoside diphosphate kinase [ndk]. 2 137 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso7g0987 149 ProSitePatterns Nucleoside diphosphate kinases active site. 113 121 IPR023005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0987 Gso-Chr7 12690486 12692702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0987 K00940 - gmx:547709 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0987 7 12690486 12692702 Gso7g0987 7 12690486 12692702 ECH