Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0982 ATGGCTCAATATTTCTTTTTGTTTGTTTTGGTGTTTGCCAGCCAACTGATGGCTGGATTCAATGCACCACTACCGCTACCATCTCCGTCATATGGAAATCATACAACCATTCTCAGCATAGACGGTGGTGGTATCAGGGGCATTATTCCTGCGACTGTTCTTGAATACTTAGACAAGGCTCTTAAGGCTAAGGATCCAACAACATCTTTAGCCCATTATTTTGATGTGATATCAGGAACTAGTACTGGTGGCCTCATGACTGCTATGTTAGCAGCCCCAAACTCATCTAATGCCAATAGTCCTCTCTTTACTCCCTCGGATGTCGTGCAATTCTACAAGAAATATGGCCCTAAAATATTTGAACCTACTAGAGCTTGGTATGAGTTTTACGAATGTCCCAAAATCAATGGAGAGGTCTTACATGATATAACTCGTAAGATATTGAAAGAAACACGACTGAATAAAACATTGACGAACGTGGTAATACCAACTTTCGACGAGAGGAAAATCAAGCCAGTTATATTCTCCAACTATAAGCTCAAGACAGAAACTTACTTAAATGCCAAACTCTCAGATATATGCATCGGGACTTCGGCTGCACCGACTTATCTACCGCCGCACCAATTTCAGAATGATGGCGTTCAATTTGATTTGGTTGATGGTGCTATGTCTGCTAATAATCCAGCGCTGGTTGCTGTGAGTGAAGTGATACAACACAATGAGCATAAAGAAATCCTGTTGCTGTCATTAGGAACAGGAACAATAAAAGCTGAGGAGAAGTTATCTGGCTTCTTTGATGACTTGCTTGATGACTTGTATGATGACTTGTGTGGACTTAAGTGGCTAGCTAGCAGCCGTAACGTGTTTTATGAGGCTCTATATAGTACAAACATGATCCATTACTATCTTGCGACGGTGTTTCCAGGTGTTTTGCCTGCGGATAACTATCTTCGAATTGAGGAGTATAACCTGGATCCATCCATGAAAGAAATGGATAATGCTGACAAGGAAAACATGGATAAGCTTGAAAAGGTAGGAAAAAGCCTTTTGCTCCAAAAAGCTTTGAGGATGAATGTGAATACTTTTGTCCCAGTTGAACTAGACCAAACAAATGCTGAAGCTCTTGACAGGTTGTCTGAGAAATTATATGCAGAGAGGCAGTTGCGTCTGAAAAGGAAATCTATGGAAAAAGGAGGAAGCCGAATTATTGAATCTGTCAAAGTCCCTTCTGGCCGAATGCATGCAACTTAA 1251 0.4101 MAQYFFLFVLVFASQLMAGFNAPLPLPSPSYGNHTTILSIDGGGIRGIIPATVLEYLDKALKAKDPTTSLAHYFDVISGTSTGGLMTAMLAAPNSSNANSPLFTPSDVVQFYKKYGPKIFEPTRAWYEFYECPKINGEVLHDITRKILKETRLNKTLTNVVIPTFDERKIKPVIFSNYKLKTETYLNAKLSDICIGTSAAPTYLPPHQFQNDGVQFDLVDGAMSANNPALVAVSEVIQHNEHKEILLLSLGTGTIKAEEKLSGFFDDLLDDLYDDLCGLKWLASSRNVFYEALYSTNMIHYYLATVFPGVLPADNYLRIEEYNLDPSMKEMDNADKENMDKLEKVGKSLLLQKALRMNVNTFVPVELDQTNAEALDRLSEKLYAERQLRLKRKSMEKGGSRIIESVKVPSGRMHAT* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0982 416 Gene3D Cytosolic phospholipase A2 catalytic domain 28 395 - -
Gso7g0982 416 Pfam Patatin-like phospholipase 38 232 IPR002641 GO:0006629
Gso7g0982 416 PANTHER PATATIN 1 400 - -
Gso7g0982 416 PANTHER XYLOSE ISOMERASE 1 400 - -
Gso7g0982 416 SUPERFAMILY FabD/lysophospholipase-like 33 365 IPR016035 -
Gso7g0982 416 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 38 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0982 Gso-Chr7 12536296 12540961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0982 25 402 Miscellaneous Gene Families AT2G26560 39.952 5.20e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0982 - - gmx:100798569 759.985