Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso7g0978 | ATGTCAGATATATGCCTACCGACTTCAGCTGCAGTCCCTCAACTACCGGCCTACTATTTCAAGAATGATGATGTTGAGTTCAATATGGTTGATGGTGGAGCGGCCGCTGACCTACAACCTGCTAATAGCTATCTTCGAATTCAGGAATATGATCTGGATCCTTCCGTGGACGATCCTACTGATGCTTCAAAAGAAAACATGGACAATCTTGAAGAGGCAGGGAAAAAAATGTTGCAAGAAAATGTTAAAAGGATAAATGTGGATACTTTTGATCTTGAAGAAACAAACGATGGTACGTATGCCGAGGCTCTTGACAGGCTGGCTAATATTTTGTACGAAGAGAAAGAGCTGCGCCTTAAAAGGAAATCTATGGAGAAAAGAGGAAGACCATTTATTGAAACTATTTGA | 408 | 0.4093 | MSDICLPTSAAVPQLPAYYFKNDDVEFNMVDGGAAADLQPANSYLRIQEYDLDPSVDDPTDASKENMDNLEEAGKKMLQENVKRINVDTFDLEETNDGTYAEALDRLANILYEEKELRLKRKSMEKRGRPFIETI* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso7g0978 | 135 | PANTHER | PATATIN | 1 | 36 | - | - | |
| Gso7g0978 | 135 | PANTHER | PATATIN | 38 | 126 | - | - | |
| Gso7g0978 | 135 | PANTHER | XYLOSE ISOMERASE | 38 | 126 | - | - | |
| Gso7g0978 | 135 | PANTHER | XYLOSE ISOMERASE | 1 | 36 | - | - | |
| Gso7g0978 | 135 | Gene3D | Cytosolic phospholipase A2 catalytic domain | 1 | 124 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso7g0978 | Gso-Chr7 | 12499272 | 12500962 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso7g0978 | 1 | 37 | Acyl Lipid Metabolism Gene Families | AT4G37050 | 50.000 | 5.91e-06 | 42.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso7g0978 | - | - | gsj:114420367 | 272.322 |