Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0893 ATGGCATCTTTGAGCATGATCCAGATCAGAACTGGGAATTGTGCATCTGGGTTTGGTTTGAATTGTGCTGGGAAGGTTAAGGTTGGTCCCAGCAGAGTTGGGTTTAAGGTGTTTGCTTCAGAGACTCAGGCTACAGAGCCTGATCTTAGTGTAACTGTTAATGGGTTGCGCATGCCTAACCCCTTTGTTATTGGGTCAGGTCCACCAGGGACCAATTACACAGTCATGAAGAGGGCCTTTGATGAAGGTTGGGGTGCTGTGATTGCAAAAACTGTATCACTTGATGCGGCAAAAGTTATAAATGTAACTCCTCGATATGCCCGGCTACGGGCAGGTGCAAATGGATCTGCAAAAGGAGAAATTATTGGATGGGAGAACATAGAACTTATCAGTGATAGGCCACTTGAAACTATGTTGAAAGAATTCAAGCAATTAAAAGAAGAGTATCCAGACAGAATTCTCATTGCTTCTATCATGGAGGAGTACAATAAGGCTGCATGGGAGGAGCTTATCGATAGAGTTGAGCAAACTGGAGTTGATGCATTTGAAATAAATTTCTCATGTCCTCACGGTATGCCAGAACGCAAAATGGGTGCTGCTGTTGGGCAAGATTGTGCTCTTCTGGAAGAGGTTTGTGGATGGATAAACGCTAAAGCCACAATTCCTGTTTGGGCTAAGATGACTCCCAACATAACTGATATTTCACAGCCAGCAAGGATTGCTCTAAGTTCAGGATGTGAGGGAGTATCTGCCATAAATACAATCATGAGCGTCATGGGAATCAACCTCAATACATTACGTCCCGAGCCTTGCGTTGAGGGGTACTCAACTCCTGGGGGTTATTCTGCAAGGGCAGTCCATCCCATAGCACTTGGGAAGGTGATGAGCATTGCAAAGATGATGAAGTCAGAGTTTGATAGTGAGAACTATACACTTTCTGCCATTGGTGGTGTTGAGACAGGCGGTGATGCTGCTGAGTTTATCCTTCTCGGGGCAAACACTGTTCAGGTGTGCACTGGGGTTATGATGCATGGCTATGGACTTGTGAAGAAACTATGTCTTGAGCTTCAAGACTTCATGAAAAAGCACAATTTCACATCCATAGAAGATTTCAGAGGGGTTTCTCTTGAGTATTTTACTACTCACACTGACTTGGTAAGAAGGCAGAAGGAAGCAGTTCAGAAGAGGAAAGCCATAAAGAAAGGGTTGCAATCTGACAAAGACTGGACAGGAGATGGTTTTGTGCAAGAAACTGAAAGCATGGTTTCAAACTGA 1275 0.4431 MASLSMIQIRTGNCASGFGLNCAGKVKVGPSRVGFKVFASETQATEPDLSVTVNGLRMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARIALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSARAVHPIALGKVMSIAKMMKSEFDSENYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLELQDFMKKHNFTSIEDFRGVSLEYFTTHTDLVRRQKEAVQKRKAIKKGLQSDKDWTGDGFVQETESMVSN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0893 424 PANTHER DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] 26 424 IPR044512 GO:0006210|GO:0006212
Gso7g0893 424 Pfam Dihydroorotate dehydrogenase 49 360 IPR005720 GO:0005737|GO:0016627
Gso7g0893 424 SUPERFAMILY FMN-linked oxidoreductases 41 375 - -
Gso7g0893 424 CDD DHPD_FMN 48 356 - -
Gso7g0893 424 PANTHER BNAA01G27800D PROTEIN 26 424 - -
Gso7g0893 424 Gene3D Aldolase class I 49 366 IPR013785 -
Gso7g0893 424 TIGRFAM pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 49 375 IPR005720 GO:0005737|GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0893 Gso-Chr7 10291951 10295394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0893 K00207 - gmx:100818990 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0893 7 10291951 10295394 Gso7g0893 7 10291951 10295394 ECH
Gso7g0893 7 10291951 10295394 Gso9g1418 9 38212370 38215877 GST