Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0870 ATGGCGGATCAGAGCCCCAAACCAGAGACCTTCGAACTCAACAATGGCAGCATGCAAGTCCTCCTCAGCAATCTCGGCTGCACCATCATCTCCTTATCCGTACCCGGAAAAGATGGATTGTTATCCGACATCGTTCTTGGCCTAGAATCTGTTGAATCCTATCAGAAAGGTCTCGCTCCTTATTTTGGTTGCATTGTGGGCAGGGTTGCAAACCGAATTAAGGATGGCAAGTTTACACTTGACGGGATTCAATACTCTTTGCCAATCAACAAACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGAGGTAGTTGAATATAAAAAAGGAAATACCCCCTCAATCACTTTTAGGTGCCACAGTCATGATGGAGAGGAAGGTTATCCTGGGGATGTCACCGTTACTGCAACTTACACGCTCACCTCAAGCACAACTCTGAGGCTTGACATGGAAGGTGTGCCGAAGGACAAGCCCACCATAGTTAACTTAGCTCAGCATACCTACTGGAACTTAGCTGGTCACAACTCAGGGAATATACTTGACCATTCAATTCAGCTATGGGCTAATCATATCACTCCTGTCGACGAGAATACAGTGCCAACCGGTAAAATCATGCCAGTGAAGGGTACCCCTTTTGATTTTACGTCTGAGAATAGAATAGGCAACACCATTAGTCAGGTTGGACTGGGATATGACCACAATTATGTGCTTGATTGTGGGGAAGAGAAAGAGGGTTTGAGACACGCTGCAAAAGTGAGGGATCCATCAAGTTCAAGAGTACTTAACTTGTGGACAAATGCTCCTGGTGTCCAATTTTACACTGCAAACTATGTTAATGGTGTTCAAGGAAAAGGAGGTGCTATATATGGAAAGCATGCCGGGTTATGTCTGGAGACACAAGGATTCCCTAATGCCATAAACCAGCCAAATTTTCCATCTGTTGTGGTTCGTCCGGGTGAGAAGTATCAACATACCATGTTGTTTGAGTTTTCCCTTGAGTGA 1020 0.451 MADQSPKPETFELNNGSMQVLLSNLGCTIISLSVPGKDGLLSDIVLGLESVESYQKGLAPYFGCIVGRVANRIKDGKFTLDGIQYSLPINKPPNSLHGGNVGFDKKVWEVVEYKKGNTPSITFRCHSHDGEEGYPGDVTVTATYTLTSSTTLRLDMEGVPKDKPTIVNLAQHTYWNLAGHNSGNILDHSIQLWANHITPVDENTVPTGKIMPVKGTPFDFTSENRIGNTISQVGLGYDHNYVLDCGEEKEGLRHAAKVRDPSSSRVLNLWTNAPGVQFYTANYVNGVQGKGGAIYGKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYQHTMLFEFSLE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0870 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Gso7g0870 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Gso7g0870 339 PANTHER ALDOSE 1-EPIMERASE 9 338 - -
Gso7g0870 339 Gene3D - 2 338 IPR014718 GO:0030246
Gso7g0870 339 CDD galactose_mutarotase_like 14 336 - -
Gso7g0870 339 PIRSF GALM 2 339 IPR015443 GO:0016853|GO:0019318
Gso7g0870 339 SUPERFAMILY Galactose mutarotase-like 9 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0870 Gso-Chr7 9932136 9935171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0870 7 337 Miscellaneous Gene Families AT3G47800 50.453 1.30e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0870 K01785 - gmx:100776238 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0870 7 9932136 9935171 Gso7g0870 7 9932136 9935171 ECH
Gso7g0870 7 9932136 9935171 Gso9g1446 9 38536840 38539674 GST