Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0846 ATGGCCTTATGGAAAGAGGAAGCCAAGAAGCAACTATGGCTGGCAGGGCCAATGGTATTTGTTAGTGTGTTTCAGTATAGTTTACAAGTGATATCTCTCGTGTTTGTAGGCCATTTGGATGAGTTGCTTCTGGCTAGTACTTCTTTGGCTACATCATTTGTCAATGCTACTGGTTTCAACGTGTTGATGGGTATGTCAAGCGCACTAGACACATTTTGTGGTCAAGCATATGGAGCAAAGCAGTTTCACATGCTTGGTGTACACACCCAAGGTGCCATGTTGGTTCTCACCCTTGTTACCATACCCCTCTCCATTATTTGGGTATTCTTAGGGCCTATTCTAGTTGCTCTCCATCAAGACAAAGAAATTGCTGCACATGCTCAACTATATGCCAGATACTTGATCCCAAGCCTTTCGGCCAATGGTCTTCTTCGGTGCATTACTAAGTTCCTACAAACCCAAAACATAGTCTTTCCTATGGTGCTAGCCACTGGACTTACTAGCTTCTTACACTTCTTTCTGTGTTGGGTTTTGGTTCAAAAAGTTGGGCTTGGCATCAAAGGATCTGCCATTGCAATTTGCATTTCTAATTGGTTTAACACCATAATACTTGCTCTTTATATAAAGCTCTCCCCTTCGTGCAAAACAACTTGGACTGGTTTCTCAAAGGAATCATTGCATAACATCCCTAAATTTCTCAAACTTGCTTTTCCTTCAACACTCATGGTGTGCTTAGAATCATGGACGTTTGAAATAATGGTGCTTCTGTCTGGTGCTCTTCCTGATGCGAAATTGCAAACTTCGATGCTTTCGATATGCCTTAACACATCTGGTATATTTTGGATGATACCATTTGGAATTAGTGCTGCTGGAAGTACAAGGATCTCAAATGAATTAGGGGCTGGTAGTCCAAAAGCTGCATATTTAGCAGTTAAAGTCACCATGTTCTTGGCCTCTGCAGTGGGGATTTTAGAATTTGCTTCCCTTATGATATTATGGAGAGTTTGGGGCCGTGTTTTTACCAATGTACATGAAGTGGTCAAATATGTGACTTCCATGATGCCACTTGTTGCTAGCTCTACCTTTATAGATTCAATCCAAACAGCATTTCAAGGTGTTGCCAGAGGATGTGGTTGGCAGAAACTTGGTGCATATGTCAATCTAGGGTCATATTATTTTTTGGGAGTTCCTTTTTCCGTTGTGTCAGCTTTTGTCTTCCACATGAAAGGACAGGGGCTATTTTTAGGGATCCTAATAGCACTTACTGTGCAAGTGGTGTGTTTCCTTCTGGTCACCTTACGCGCCAATTGGGAGAAAGAAGCAAAAAAGGCAGCAAAAAGAGTAGGAGGCGATGGAGTCCAACTTGGGGACCTTCCGTGTGACCAAAATGCCAATACTGCTTGA 1404 0.4231 MALWKEEAKKQLWLAGPMVFVSVFQYSLQVISLVFVGHLDELLLASTSLATSFVNATGFNVLMGMSSALDTFCGQAYGAKQFHMLGVHTQGAMLVLTLVTIPLSIIWVFLGPILVALHQDKEIAAHAQLYARYLIPSLSANGLLRCITKFLQTQNIVFPMVLATGLTSFLHFFLCWVLVQKVGLGIKGSAIAICISNWFNTIILALYIKLSPSCKTTWTGFSKESLHNIPKFLKLAFPSTLMVCLESWTFEIMVLLSGALPDAKLQTSMLSICLNTSGIFWMIPFGISAAGSTRISNELGAGSPKAAYLAVKVTMFLASAVGILEFASLMILWRVWGRVFTNVHEVVKYVTSMMPLVASSTFIDSIQTAFQGVARGCGWQKLGAYVNLGSYYFLGVPFSVVSAFVFHMKGQGLFLGILIALTVQVVCFLLVTLRANWEKEAKKAAKRVGGDGVQLGDLPCDQNANTA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0846 467 CDD MATE_eukaryotic 7 443 IPR045069 GO:0042910|GO:1990961
Gso7g0846 467 PANTHER PROTEIN DETOXIFICATION 5 448 - -
Gso7g0846 467 TIGRFAM matE: MATE efflux family protein 17 413 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso7g0846 467 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 448 - -
Gso7g0846 467 Pfam MatE 238 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso7g0846 467 Pfam MatE 17 177 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0846 Gso-Chr7 9577139 9582120 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0846 K03327 - gmx:100816863 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0846 7 9577139 9582120 Gso7g0846 7 9577139 9582120 ECH
Gso7g0846 7 9577139 9582120 Gso9g1467 9 38822257 38822718 GST