Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0843 ATGTCGCTCCAGGGCAGCGCCAGCGGAAACGGCACCGTGGCCGCGGCGTCGACGGCGAGCCTGAGGCTGCGGCTGAACCCTAACAAGGAGCACAAGCCCGATGGCTACGAGGACATGCAATTGGATTTCAGCCCTAACATTTTTAGCTCGCTGGAGAGGTACCTCCCTCCGAGCATGCTCAACGTGACGCGTGACGAGAAGGCCAAGTTCATGCGCGAGATTCTCCTCAAGTATCTGCCCCTCGGGGAACGCAACAGAGCACAAAAGCATAGAGAATATAGAGAGAGGATAATAGCAAATTATCAGCCTCTACATCTGGAGTTGTACTCTGTGGATCCTGCTACATTCTTTGTCCCCACATTTCTGAGAGCAATTAATGATAATACAGAACAAAGCTATAGAAGTATAGTATCTGAACCCTTTCCAGGCATTTTTATATTTGACATATTTCAGACCCACTTTTGTGAGTTATTGCTGTCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACTAAATTTCGGATCATGCATCCCAATACAATGAATAAATTTGGTGCTGTACTTGATGACTTTGGACTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATCCGTCCCTTATCTAGAGTCTTCTTTGCAGAAGTTGGCGGGTCAACCCTGGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACTTAGGTTTCCATGTGGATGACTCAGAAGTAACCTTAAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGTGTACGATGTGAGAAACATGTAAATACTGGAAGTCATTCAGAGGAGATCTTTGATTATTCTCATGTCCCTGGACGAGCCGTCCTTCATCGTGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCTGGTAATCGGGTCAACCTACTTCTATGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACTGTATCAAAAAGATTTCTCCAGCTGGTGTGGCGAGTGCAATCGTGAGAAAAAGGAAAGGCAGCGCTCAACAGTTGCTGCTACCAAATTGGATTTGTTCTGGAGGGAAGGTGAATCCACTGCATAA 1113 0.451 MSLQGSASGNGTVAAASTASLRLRLNPNKEHKPDGYEDMQLDFSPNIFSSLERYLPPSMLNVTRDEKAKFMREILLKYLPLGERNRAQKHREYRERIIANYQPLHLELYSVDPATFFVPTFLRAINDNTEQSYRSIVSEPFPGIFIFDIFQTHFCELLLSEIENFEKWVTETKFRIMHPNTMNKFGAVLDDFGLETMLDKLMEGFIRPLSRVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGVRCEKHVNTGSHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKLYQKDFSSWCGECNREKKERQRSTVAATKLDLFWREGESTA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0843 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 369 - -
Gso7g0843 370 Gene3D q2cbj1_9rhob like domain 142 322 - -
Gso7g0843 370 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 8 369 - -
Gso7g0843 370 SMART p4hc 142 321 IPR006620 GO:0005506|GO:0016705|GO:0031418
Gso7g0843 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 322 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0843 Gso-Chr7 9521675 9535541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0843 - - gmx:100812049 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0843 7 9521675 9535541 Gso7g0843 7 9521675 9535541 ECH
Gso7g0843 7 9521675 9535541 Gso9g1472 9 38858691 38865940 GST