Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0841 ATGGGGATCCCTGGATTGAGCAATCAGAATAGTGGGCAGCAAAGATTAGGCATAACTGAGCCCATTTCATTGGCTGGACCAACTGATGATGATGCGATCAAGACGCTTGAACTTGAGAAGTACTTGCAAGGTGTTGGATTGTACGAGAGTCAGGAGGAGGCTGTAGTAAGGGAGGAAGTGCTTGGCAGGCTGGACCAGATTGTGAAGATTTGGGTTAAGAACATCAGCCGGGCAAAGGGGTTCAATGAACAACTGGTGCATGAAGCAAACGCCAAGATTTTCACCTCCGGCTCTTATCGGTTAGGGGTGCATGGCCCTGGAGCTGATATAGATACTCTTTGTGTGGGACCTAGACATGCATCCAGAGATGAAGATTTCTTTGGTGGGCTACAGAAGATGCTATCTGAGATGCAAGAAGTAACAGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTAGCGTTGTGGGTTATTCCTGAAGATTTAGATATATCACAGGAATCAATATTACAAAGTGTTGACGAACAAACTGTTCTTAGTCTTAATGGTTGTAGAGTAACTGACCAGGTCCTGCGATTGGTTCCAAATATTCAGACCTTTCGCACGACATTGAGATGCATGAGGTTTTGGGCCAAGCGTCGTGGTGTTTATTCAAATGTTGCAGGTTTTCTTGGTGGTATAAACCTGGCATTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTTCCTGATATGTTAGTGTCTCGATTCTTCAGGGTATATACTCAATGGCGATGGCCTAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTACCAGTTTGGGATCCTAGAAGAAATCCCAAGGATAGATATCATCTAATGCCTATAATTACTCCTGTTTATCCCTGCATGAACTCCACTTACAATGTGACATCAAGTACATTGCGTGTTATGTCAGATGAGTTTCGGAGGGGAAGTGAAATATGTGAGGCTATGGAGGCTAGCAAGGCTGATTGGGATACCCTTTTTGAGCCTTATCCCTTTTTTGAATCATACAAGAATTATCTACAGATAGACATAACAGCAGAGAATGCAGATGACCTTAGACAATGGAAAGGCTGGGTTGGGTCTCGTCTCCGGCAGTTGACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGTCATCCACATCCTGGTGAATTCTCAGACAATTCTAGACCTTTTCACCACTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGTTAACTGTTGAAGAATTTAAACATTCTGTCAACGTTTACACTCTATGGAAACCTGGAATGGATATCCATGTGTCCCATGTGAAACGCAGTAACATTCCTAACTACATATTTCCTGGTGGTGTGCGACCTACCTTCCCATCAAAAGTAACTGCCGAGAATAAACAGAGTTCCAAATCAAGGGCTTCTGGCCATGGTCAAACAGAAAAGCCTCAAGGAGGTAAAGCTGTTGCAGTTGGAGCAGATGATGTGAGGAAGAGAAAGAGATCAGAGGACAACATGGATAATAACCCAAGGAATTCCAGGTCCCCTGTATCTTTACCTCCCCCCAGCAGGGAAGTTCATGAAGATATATCTCCTATTAGTGCTTCAAGTTCTTGTTCTATGAAATTTGATGAATCAGAAGTGAATAGTATTGGTGGACAAAAGAGCGAGAAACTTTGTCTGAAATCTCCAGGTGAGATTCCTTCTGGGGATAGTGGGACCAATGGATCAGTGACAAGCAACCAACAAGTGAACCCTGTATTTGCAGCTGCTGATACATCTAATTCTAAAGAAGAAGAAAAGCTAGCCATTGAAAAGATTATGTCCGGTCTGTATGATGCACATCAAGCCTTTCAAGAAGAACCCAAAGAGCTTGAAGATAATACTCAATATAAAAATCAAGACAAAGATTCTGGTGCGAACATGAAAAACAACATGGAATCTTTAGACTCAAAGCCTGCAGTGCCAGAAGAGCCAGTTATTTCTAAGGAAATTACTTGTTCAACTCATTTATGCTCCAATGAGAGCTTGGAGGAGCTTGAGCCTGCTGAGCTAACAGCACCATTGTTAAGTGGGCCTCCTGCACCTGTACCAATGAAGAAGCCGCTTATCAGGTTGAACTTCACCTCCTTAGGCAAAGCTGCCGACAAAAGTGTTTAA 2274 0.4292 MGIPGLSNQNSGQQRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNVYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRNSRSPVSLPPPSREVHEDISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEIPSGDSGTNGSVTSNQQVNPVFAAADTSNSKEEEKLAIEKIMSGLYDAHQAFQEEPKELEDNTQYKNQDKDSGANMKNNMESLDSKPAVPEEPVISKEITCSTHLCSNESLEELEPAELTAPLLSGPPAPVPMKKPLIRLNFTSLGKAADKSV* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0841 757 MobiDBLite consensus disorder prediction 672 686 - -
Gso7g0841 757 Pfam Nucleotidyltransferase domain 77 170 IPR002934 GO:0016779
Gso7g0841 757 MobiDBLite consensus disorder prediction 530 546 - -
Gso7g0841 757 Gene3D - 17 359 - -
Gso7g0841 757 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Gso7g0841 757 MobiDBLite consensus disorder prediction 656 699 - -
Gso7g0841 757 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 362 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gso7g0841 757 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Gso7g0841 757 MobiDBLite consensus disorder prediction 568 591 - -
Gso7g0841 757 MobiDBLite consensus disorder prediction 606 630 - -
Gso7g0841 757 Pfam Poly(A) polymerase predicted RNA binding domain 364 423 IPR007010 GO:0003723|GO:0043631
Gso7g0841 757 MobiDBLite consensus disorder prediction 499 517 - -
Gso7g0841 757 CDD NT_PAP_TUTase 56 211 - -
Gso7g0841 757 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Gso7g0841 757 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 718 - -
Gso7g0841 757 PANTHER POLY A POLYMERASE 1 718 - -
Gso7g0841 757 MobiDBLite consensus disorder prediction 497 635 - -
Gso7g0841 757 MobiDBLite consensus disorder prediction 656 671 - -
Gso7g0841 757 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Gso7g0841 757 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0841 Gso-Chr7 9482999 9495575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0841 K14376 - gmx:100815801 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0841 7 9482999 9495575 Gso7g0841 7 9482999 9495575 ECH