Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0774 ATGGAAGATGATCAATCTACTCAGATCAAAGGTGTTGTTATAATCTCCCTTCCACCACCAGATAACCCTTCTTTGGGCAAAACCATCACTGCTTTTGCTTTCTCTAATAACCCTTCTCCTCCCCCTCAACCTTTTATTCAACCCCATCAACACCAAAGTCAACAAACACACCCCAATGCTCAACACAACACTGATCCTCCACTTCAGTCCTACCCATCTAATCCTCAGCTTAGTTTTTCATTCAGAAGACTCTTCCACAGCACCCCAGTGAAGCTTTTCTCATTCTTTGGTACTCTTCTCTTTGCTCTCTTTCTCTATGGTTCTGTTTCTTCAACCACCACTGTGGACCTACGTGGCCGCAAGAATGATGGTGATGATGACAAAGCCACTTCATTTTTGTTCCCTTTGTTTCCGAAATTTGGTGTTTTGGGGCAGAAGGATTTGAAGCTCCAACTGGGGAAGCTTGTTCAAAAAGAGAAGTTTTTGACGCAAAGAGATGTTGGTGATGATGGTTCTGGGGTTGTGGCAGTTGACTCTTCATCCGTTTTTCCAGTCAGTGGAAATGTTTATCCAGATGGGTTGTATTTCACTATTTTACGTGTTGGAAATCCTCCAAAAAGTTATTTTCTTGATGTGGACACAGGGAGTGATTTAACTTGGATGCAGTGTGATGCTCCATGCAGAAGCTGTGGGAAGGGAGCACATGTTCAATACAAGCCAACAAGATCCAATGTAGTATCATCTGTGGACTCTCTCTGTTTGGATGTTCAGAAAAATCAGAAGAATGGACATCATGATGAAAGTTTGCTACAGTGCGACTATGAAATTCAATATGCAGATCATAGTTCTTCCTTGGGGGTTCTTGTTAGAGATGAGCTTCATCTTGTAACTACTAATGGATCCAAAACCAAGCTAAATGTTGTTTTTGGGTGTGGATATGATCAAGAAGGCTTAATTTTGAACACATTGGCTAAAACAGACGGAATCATGGGATTGAGTAGGGCAAAAGTCAGCCTACCCTACCAGTTAGCTAGTAAAGGGCTTATTAAGAATGTGGTTGGTCATTGCCTTAGCAATGATGGAGCTGGCGGTGGATACATGTTCTTAGGTGATGATTTTGTGCCATATTGGGGTATGAATTGGGTACCCATGGCCTATACCCTTACTACGGATTTATACCAAACTGAGATTCTTGGAATCAATTATGGAAATCGTCAACTCAAATTTGATGGCCAAAGCAAAGTAGGAAAAGTGTTTTTTGATAGTGGCAGTTCTTATACATATTTCCCAAAAGAGGCATACTTGGATCTTGTTGCTTCTCTTAATGAAGTTTCTGGGTTAGGACTTGTTCAAGATGATTCAGATACTACTTTACCCATTTGCTGGCAAGCAAATTTCCAAATCAGATCTATCAAAGATGTCAAGGATTACTTCAAGACCTTAACTCTTCGGTTCGGAAGCAAGTGGTGGATTTTGTCCACATTGTTTCAGATACCTCCAGAGGGTTACTTGATCATTAGTAACAAAGGCCATGTGTGCTTGGGAATCCTTGATGGTAGTAAAGTAAATGACGGATCCTCAATTATACTTGGAGACATTTCATTGAGAGGATATTCGGTTGTGTACGATAATGTGAAGCAAAAAATTGGTTGGAAGCGAGCAGACTGTGGCATGCCAAGCAGTAGATTAAGAAAGAAAAATAATTTCATCCCAGATAGTATGCTATAA 1728 0.4068 MEDDQSTQIKGVVIISLPPPDNPSLGKTITAFAFSNNPSPPPQPFIQPHQHQSQQTHPNAQHNTDPPLQSYPSNPQLSFSFRRLFHSTPVKLFSFFGTLLFALFLYGSVSSTTTVDLRGRKNDGDDDKATSFLFPLFPKFGVLGQKDLKLQLGKLVQKEKFLTQRDVGDDGSGVVAVDSSSVFPVSGNVYPDGLYFTILRVGNPPKSYFLDVDTGSDLTWMQCDAPCRSCGKGAHVQYKPTRSNVVSSVDSLCLDVQKNQKNGHHDESLLQCDYEIQYADHSSSLGVLVRDELHLVTTNGSKTKLNVVFGCGYDQEGLILNTLAKTDGIMGLSRAKVSLPYQLASKGLIKNVVGHCLSNDGAGGGYMFLGDDFVPYWGMNWVPMAYTLTTDLYQTEILGINYGNRQLKFDGQSKVGKVFFDSGSSYTYFPKEAYLDLVASLNEVSGLGLVQDDSDTTLPICWQANFQIRSIKDVKDYFKTLTLRFGSKWWILSTLFQIPPEGYLIISNKGHVCLGILDGSKVNDGSSIILGDISLRGYSVVYDNVKQKIGWKRADCGMPSSRLRKKNNFIPDSML* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0774 575 Gene3D Acid Proteases 175 371 IPR021109 -
Gso7g0774 575 PRINTS Pepsin (A1) aspartic protease family signature 201 221 IPR001461 GO:0004190|GO:0006508
Gso7g0774 575 PRINTS Pepsin (A1) aspartic protease family signature 418 429 IPR001461 GO:0004190|GO:0006508
Gso7g0774 575 PRINTS Pepsin (A1) aspartic protease family signature 528 543 IPR001461 GO:0004190|GO:0006508
Gso7g0774 575 Pfam Xylanase inhibitor C-terminal 400 552 IPR032799 -
Gso7g0774 575 MobiDBLite consensus disorder prediction 34 72 - -
Gso7g0774 575 SUPERFAMILY Acid proteases 186 556 IPR021109 -
Gso7g0774 575 PANTHER ASPARTYL PROTEASES 16 560 IPR001461 GO:0004190|GO:0006508
Gso7g0774 575 Gene3D Acid Proteases 377 558 IPR021109 -
Gso7g0774 575 Pfam Xylanase inhibitor N-terminal 195 371 IPR032861 -
Gso7g0774 575 MobiDBLite consensus disorder prediction 48 72 - -
Gso7g0774 575 PANTHER ASPARTYL PROTEASE APCB1 16 560 - -
Gso7g0774 575 ProSiteProfiles Peptidase family A1 domain profile. 195 552 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0774 Gso-Chr7 8531345 8535741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0774 177 556 Miscellaneous Gene Families AT1G77480 46.392 2.14e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0774 - - gmx:100783933 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0774 7 8531345 8535741 Gso7g0774 7 8531345 8535741 ECH