Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0671 ATGGCCACGCCGGACGCCGTCGCAGCCTTCATGCGCATCACCGGAGCACCGGAGTTCGTCGCCGTCCGGAAATTAGAGGAATACGGAGGCAATTTAAATGAAGCTATCAATGCCCATTTTCTTGAGGTGGATAGGCACATATTATCAGGTCAAGGGCAAAATTTTGCTGCTGCCCCACAATATGATAACTTTGGTGCAAGTAGTCAAAACCGTGGTGGTGGATCAAATGGAATTTTACCTTTTCTCAATGCTGCTAGAAGATTTCGACCTTCACTATTACTTGATCCAAATTATAGGAAAGAACTTAGAGATCTATATAATGGGATTGGTGGTTCTACTTCATTCACGAGTCGCCCACCACCTCTTACTTCCCATCCAGCGGAGGTGACGGAAGTTCCTGCAGGGATCAATAGTGCATTCAATCCACAATATCAATCAGGATTAAGCACTACAGGTGCAGATATGACTGGTCATTTATCATCTCACGGTTTAGGAGTTCGTGGGACAGATGGTTATCAGAACCAATACCCTTTAGCTCAGTCAAACGCCTCACATGTTCCTGATAGTGAAATAGAGGAAGCAATGCTTCAAGCAGCGATAGAGGCCTCAAAAACAGAGAGGAGAGGAGGTTCTTTATGGGAGCAAATTGATGTTCTTAATGATTCATCTGATGGTGGGCATCCTCAAGGTCATTTTCAGCAAGAAGATGATGATTTGGTTCATGCACTTTCGTTGTCCTTAGAGACAGCAGAGCACGAGAAAGCAAAGCGTGACCTTCTAGTAGCAGAGGAAAAGGAAGGGCTTGGAGTTCATAATTTACTAGACAAGGGAAAGAAAACCAGCACTAACAGAAGCCAAATAGAGTGGGGTGGTATTTCTTCTGAAGAGCTTAATGAAGCTTTGTTAGCTGAAACTGCACTTTTTGGTGAAATTTCCAATCACAGTTCTCAAAATTTTTCATCCTTGCCTAATCTGCAACATCATCCAGAACAAAATGTGGATCCCAAGACGCAATGCCTGTCCACTTCCATGTCACAATTATTAAATGACTCTCGCTTGCTGAAACAACAACAGGATGCTGAATATCTAGAGTCACTACGAGCTGATAAACAAAAGGAATTGAATTCTCTCAATAAAACTGAAAGCCATTCCTCAAAGGAAGAAGAGTCATGCAAAAAAATGCTTGAAGAAAAGGGATTGGGGAAAATGCTTGACAAGAAAGAAGTTGGGCTTCCCAAAGAACCGCCGTTATCTGATGAAGTAATTACTATCGTTGTTCGGATGCCAGATGGTGGTCGTTGTGAACGTCGCTTTCTCAAAACTGACAAACTAGAGCTTCTTTTTGATTTCATAGACATTTGTGGAGCACAGAAGCCTGAAACCTATAGACTTGTAAAGTCATACCCGCGTCGTGCCTACAGTATTAACGATTGCTCATCAACCTTCAATGAAGTAGGCCTTAGCAAAAACAATGAAGCTTTGTTTCTGGAGTTGATTTAG 1500 0.4253 MATPDAVAAFMRITGAPEFVAVRKLEEYGGNLNEAINAHFLEVDRHILSGQGQNFAAAPQYDNFGASSQNRGGGSNGILPFLNAARRFRPSLLLDPNYRKELRDLYNGIGGSTSFTSRPPPLTSHPAEVTEVPAGINSAFNPQYQSGLSTTGADMTGHLSSHGLGVRGTDGYQNQYPLAQSNASHVPDSEIEEAMLQAAIEASKTERRGGSLWEQIDVLNDSSDGGHPQGHFQQEDDDLVHALSLSLETAEHEKAKRDLLVAEEKEGLGVHNLLDKGKKTSTNRSQIEWGGISSEELNEALLAETALFGEISNHSSQNFSSLPNLQHHPEQNVDPKTQCLSTSMSQLLNDSRLLKQQQDAEYLESLRADKQKELNSLNKTESHSSKEEESCKKMLEEKGLGKMLDKKEVGLPKEPPLSDEVITIVVRMPDGGRCERRFLKTDKLELLFDFIDICGAQKPETYRLVKSYPRRAYSINDCSSTFNEVGLSKNNEALFLELI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0671 499 SMART uim 234 253 IPR003903 -
Gso7g0671 499 SMART uim 191 210 IPR003903 -
Gso7g0671 499 CDD UBX 423 497 - -
Gso7g0671 499 Gene3D - 418 498 - -
Gso7g0671 499 CDD UBA_Ubx1_like 4 40 - -
Gso7g0671 499 Pfam UBA-like domain 5 40 - -
Gso7g0671 499 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 286 499 - -
Gso7g0671 499 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 3 284 - -
Gso7g0671 499 SMART ubx_3 415 498 IPR001012 GO:0005515
Gso7g0671 499 MobiDBLite consensus disorder prediction 373 392 - -
Gso7g0671 499 Pfam UBX domain 420 497 IPR001012 GO:0005515
Gso7g0671 499 PANTHER FAS-ASSOCIATED PROTEIN 286 499 - -
Gso7g0671 499 PANTHER FAS-ASSOCIATED PROTEIN 3 284 - -
Gso7g0671 499 ProSiteProfiles UBX domain profile. 417 495 IPR001012 GO:0005515
Gso7g0671 499 Coils Coil 360 380 - -
Gso7g0671 499 SUPERFAMILY Ubiquitin-like 409 492 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0671 Gso-Chr7 7170559 7178087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0671 - K18726 gmx:100795740 981.089