Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0631 ATGGGAGGGATGTTGACGATTGAGAGTAAAGCAGGACAGGACAGAATTAGCGAATTACCGGACGATGTTGTGTATCACATCCTTTCGTTCCTTACAATCAAGGAAGCCATTGCTACATCCTTGTTATCTACGAGGTGGAGATTTCTATGGACCATGCTTCCTTCTCTTCACATCGACTGCTCCAAACCAATCATGAAACTCTACCATAGTGTCGATGTTTTCTTGGGTCTATTTAGAACACAAAAGATCTCAAGGTTTCATCTCAGATGTAATAATGATTGTTGTCTCAGTTACGCGGAAGAATGGGTCAACGCAGTTGTGTCCAGAAAAGTTGAACATGTGAATATCTCCTTATGCATGTGCCGTTCAATTATTTTCAGATTCCCCCACTTGTTCATCTGTACCACACTTGTTACCTTGAAGATCGAGGGCCTCTTTCCTTTCTCTATTCCTTATGATGTTCATCTCCCTAATCTCCAGATTTTTCACCTGCACGTAAATGCATTATTGAGCTTCCCCAGTATTAACAAGCTTATATCTGGATCTCCAGCTCTTGAACTGTTTGATCTGAAGCAGAACTGGTGGGAGAGTCAGTTGAAGATTTTGCTTAAGCATAACTCTCAAGTTATCCAAGTATTCCACCACAGCTCTTTTTATGGTCTTGTTATACAAGATGATCGTGATTATGATTTTATCTCAAACTGTATGTACACTCATCGTTGGCCTAACATTCTTAAAGCCAAGGTTTGTTTGACAGTGCATCACTGCGCTAAGAATCTTTATGCGAACCAAATTGTTTCTAACATTCTCCAAGGACTGTGTAATGTTGAATTTCTGTCATTGGGTGATTTTAGGGAAGAGATGGACCCTTCTATTCTTGATCTTCCAAATTTTGAGAATTTAGTTGAGCTAAGGCTTTTTCTTAAAAATGCTGACTCCTTATTTCTGGAACTTCCTGCCAAGTGTCCTAAGCTTGAAGTTCTTGAAGTTAATATCATGGATGACCGCTACGGTATAAATCAGAGATGTCGATATCATATTACTGGAGGAGTAAAGAAGCACGACCTATCAATTGTTCCTCTTTTACCTGAAACACTCATTCTTGGAAAATGCTTTAGTAATCCACTTACATGA 1134 0.3933 MGGMLTIESKAGQDRISELPDDVVYHILSFLTIKEAIATSLLSTRWRFLWTMLPSLHIDCSKPIMKLYHSVDVFLGLFRTQKISRFHLRCNNDCCLSYAEEWVNAVVSRKVEHVNISLCMCRSIIFRFPHLFICTTLVTLKIEGLFPFSIPYDVHLPNLQIFHLHVNALLSFPSINKLISGSPALELFDLKQNWWESQLKILLKHNSQVIQVFHHSSFYGLVIQDDRDYDFISNCMYTHRWPNILKAKVCLTVHHCAKNLYANQIVSNILQGLCNVEFLSLGDFREEMDPSILDLPNFENLVELRLFLKNADSLFLELPAKCPKLEVLEVNIMDDRYGINQRCRYHITGGVKKHDLSIVPLLPETLILGKCFSNPLT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0631 377 Pfam F-box domain 16 52 IPR001810 GO:0005515
Gso7g0631 377 ProSiteProfiles F-box domain profile. 13 71 IPR001810 GO:0005515
Gso7g0631 377 SUPERFAMILY RNI-like 87 330 - -
Gso7g0631 377 Gene3D Ribonuclease Inhibitor 76 338 IPR032675 -
Gso7g0631 377 Gene3D - 4 56 - -
Gso7g0631 377 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 14 337 - -
Gso7g0631 377 SUPERFAMILY F-box domain 12 70 IPR036047 GO:0005515
Gso7g0631 377 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0631 Gso-Chr7 6713887 6715237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0631 14 195 EF-hand Containing Proteins AT5G41840 34.300 5.70e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0631 - - gmx:102659597 775.007