Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0622 ATGGAGCATTTAGATGATGGAAAAGAATCATCAAATAGTGTCAATGAAATAGAAGCCACTAATTCCCTACTTATCTGTGGCCTTCCAGATGATCTTTCTCTTATGTGCCTAGCAAGAGTTCCTAGAAAATATCATTCTGTTCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTAATTTGCAGTGAAGAGTGGTATCATTATCGCCGAAAGCACAAACTTGATGAGACCTGGATCTATGCTTTGTGCAGGGACAAATCGAATGAGATTTTCTGTTATGTTTTGGATCCAACCACCTCAAGAAGATATTGGAAGCTCCTTGATGGTCTTCCACCTCACATCTCAAATAGAAAAGGCATGGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTATTGGGTGGTTGTAGTGGGTTTCTAGATTCTACGGATGAGGCTTATTCATATGATGCATCCTCAAATTGTTGGGTTGAAGCTGCTTCCTTGTCAAATGCTAGGTGCTACTTTGCTTGTGAAGTTTTGGATGAAAAACTATATGCTATTGGGGGATTAGTTTCAAATTCAAGTGATAATTCTTGGGATACTTTTGACCCTTTGACAAAGTGTTGGACATTCCATATAGATCCTAATATTGCTTCTGATATTGAAGATTCAGTGGTTCTTGATGGGAAGATATACACCCGATGTGCCAGACATACGGATGTAGCTCCTCATGCTTTTGCTGTTGTATATGAACCATCAAGTGGCACGTGGCAGTATGCAGATGCTGACATGGTTTCAGGATGGACAGGTCCTGCAGTTGTTGTTTATGGTACCCTTTATGTGTTGGATCAGAGTTTGGGAACTAGGTTAATGATGTGGCATAAAGAGAGACGCGAGTGGATACCTGTTGGAAAGCTTTCGCCTTTGCTTACTAGACCACCTTGTCAGCTTGTTGCAGTTGGTAAAAGCATTTTTATTGTTGGGAAAACGCTTAGCACTGTGGTTGTCGATGTTGGTGATTTGGGGAATGAGGGTCAGGTGATGATGGGTTCTTCTATACCTGGATTATTATCGGATTTCAATGTAATAAGTTGTAAATGCTTGTCAATCTGA 1089 0.405 MEHLDDGKESSNSVNEIEATNSLLICGLPDDLSLMCLARVPRKYHSVLKCVSKRWRDLICSEEWYHYRRKHKLDETWIYALCRDKSNEIFCYVLDPTTSRRYWKLLDGLPPHISNRKGMGFEALGNKLFLLGGCSGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYAIGGLVSNSSDNSWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHAFAVVYEPSSGTWQYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGKLSPLLTRPPCQLVAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISCKCLSI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0622 362 Pfam F-box domain 26 62 IPR001810 GO:0005515
Gso7g0622 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 14 336 - -
Gso7g0622 362 Gene3D - 67 335 IPR015915 GO:0005515
Gso7g0622 362 SUPERFAMILY F-box domain 25 81 IPR036047 GO:0005515
Gso7g0622 362 SMART fbox_2 28 68 IPR001810 GO:0005515
Gso7g0622 362 SUPERFAMILY Kelch motif 83 322 IPR015915 GO:0005515
Gso7g0622 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 14 336 - -
Gso7g0622 362 Pfam Kelch motif 116 161 IPR006652 GO:0005515
Gso7g0622 362 Pfam Kelch motif 163 202 IPR006652 GO:0005515
Gso7g0622 362 SMART kelc_smart 127 174 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0622 Gso-Chr7 6639939 6643424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0622 28 303 Miscellaneous Gene Families AT4G33900 27.517 3.10e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0622 - - gmx:100798211 758.829