Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0566 ATGGACGCTGTGTCATCCGCACTACTAGAGCCAGTAACTAATTCTGTGTTGGATCTGCTTAAAAAGCAAGTGGATTACATCCGTTACAGGCGAAACTTTGATGAACTAGACGAGTGTGTTAAGCAGCTTAAACATAAAAAGGAGATAGTAGATCATCAATGTGAGGAAGCTGTCAAAAATGGACACGAAATTGAAGGTAAGGTTAGAGAATGGTTAGGGAAAGTGGGTAAATTTGAGACAGAAGTGGAGAAGTATTGGAACGATGATGGCCACAAAAAGACACGGTTTTCCAACTATTTATTTCCTTACTTTAGGCATAGACTAGGCAGACTAGCAAAGAAGATGGCAGTTGAGGGTAAAAAGATAACCGATGATTGCCCCAAGTCTGATGAAATTGCCTATCGGGTATACGTAACATCTAATGATGCCATTTTGTCTAATAATGACCTTATGGATTTTGGTTCTAGAAAATCCATAATGGAACAAATAATGGCAACACTTGTTGAAGATCCCACTGTGAAAATGATTGGAGTGTATGGACGAAGTGGGGTGGGTAAGAGCACTTTAATCAAAGCAATTGCTAAAATTGCTCGAGACAAGAAGTTGTTTAATGTGGTGGCTTTTTCAGAAATAACAGACAACCCCAATCTAAAACAAGTCCAGGAAGATATTGCTTACCCTTTGGGATTGAAATTGGAAGGAGAAGGTGAGAATGTAAGAGCTGATAATCTACGAAGGAGGTTAAAGAAAGAGAAAGAGAACACCCTTATAATCTTGGATGACCTTTGGGACAGATTAGACTTGAATAGGTTGGGAATTCCACTTGATGGTGATGTTGATGATAATGATTTAAGCAAGAAGACAAATAGTGATAATCAGGGTCCCCAAGGGCCGACAAAAGAAAAATCTCTTGGTGATTATAAGGGTTGCAAAATTTTGCTAACTTCAAGGAAACAAAATGTATTAACGGATAAAATGGAAGTTAAATTAACTTTCTGTGTAGAGGAATTAGATGAAAAAGATGCTCTGAAGTTGTTTCGGAAGGAGGCTGGAATACATGGTGAAATGTCCAAGTCTAAACAAGAAATTGTTAAGAAGTATTGTGCTGGGTTACCTATGGCAATAGTTACAGTTGGAAGGGCATTAAGAGACAAGAGCGACTCAGAGTGGGAAAAACTTAAAAACCAAGACCTGGTGGGAGTTCAGAATCCGATGGAGATTTCTGTAAAAATGAGTTATGACCATCTAGAAAATGAGGAGCTCAAGTCCATTTTCTTTCTTTGTGCTCAAATGGGTCATCAACCCCTAATTATGGACTTGGTGAAGTATTGCTTTGGTTTGGGAATACTTGAAGGGGTTTACTGGCTTGGGGAAGCTCGGGACAGAATATCTACATCAATCAAAAAGCTGAAAGACTCAGGTTTGGTGTTGGATGGAAGTTCTAGTATTCATTTCAATGTGCACGATCTGGTTCGAGATGCTGCTTTATCTATAGCACAGAACGAGCAAAATGTATTTACTTTGAGAAATGGGAAACTTAATGATTGGCCTGAACTCAAGAGGTGCACTTCTATTTCTATATGCAATAGTGATATCATTGATGAGCTTCCTAATGTTATGAACTGTCCTCAACTTAAATTTTTCCAAATTGACAATGATGATCCATCTTTAAAAATACCTGAGAGTTTTTTTAAGAGAATGAAAAAACTCAGAGTGTTAATATTGACTGGCTTTCATCTATCAAGCTTACCATCTTCAATTAAGTGCCTATCAGACCTCAGATTGCTTTGTTTGGAGCGATGCACTTTAGATGACAACTTATCCATCATAGGGAAGCTGAAAAAATTAAGAATTCTCAGCTTTTCTGGATCTCGAATTGAAAATTTGCCAGCTGAGTTGAAGGACTTGGATAAACTACAATTACTAGACATCAGCAATTGTTCAATAGTCACCATGATTCCACCTAATCTTATATCAAGGTTGACTTCGTTGGAAGAGCTGTATGTAAGAAAGTGTTTCATGGAAGTGTCGGAGGAAGGAGAGAGAAACCAAAGTCAAAATTCATTTATTTCTGAACTAAAGCATTTGCATCAATTGCAAGTGGTGGACTTAAGCATTCCATGTGCTGAATTTTTTGCAAAGGAATTGTTCTTTGACAACTTAAGTGATTACAAGATTGAGATTGGGAACTTCAAAACTCTTTCAGCTGGAGATTTCAGAATGCCTAATAAGTATGAAAATTTCAAATCTTTGGCATTGGAGCTGAAGGATGACACTGACAATATTCACTCTCAGACAGGAATAAAGTTGTTGTTTGAAACAGTTGAAAATTTGTTGTTGGGAGAGCTGAATGGTGTTCAAGATGTTATTAATGAGTTGAATTTGAATGGATTTCCACATCTGAAACACTTTTCCATCGTAAACAACCCTAGCATCAAATATATCATCAACTCAAAGGATTTGTTTTATCCTCAGGATGTTTTTCCCAAGTTGGAATCTCTATGTCTCTACGAACTAAAAGAGATAGAGATGATATACTTTAGTTCAGGTACAGAGATGATATGCTTTAGTCCATTTACAGATTGCTCGTTCACCAAATTAAAAACGATCAAGGTCGAGAAGTGTGACCAATTGAAGAATCTTTTCTCCTTTTGCATGGTTAAATTGCTTGTGAGTCTTGAAACAATTGGTGTTTCCGATTGTGGTTCTTTAGAGGAGATCATTAAAATACCTGACAATTCTAATAAGATTGAGTTTCTTAAGTTGATGTCTTTGTCACTTGAATCATTATCATCATTCACTAGTTTTTATACCACAGTAGAGGGGTCTTCTACAAACAGGGATCAGATACAAATTACTGTTATGACTCCTCCTCTTTTTGGTGAACTGGTTGAAATACCAAACTTAGAGAACTTGAGTTTAATCTCAATGAACAAGATCCAGAAGATATGGAGCGACCAGCCCCCGTCAAACTTCTGCTTTCAAAACTTAATAAAATTAGCTGTGAATGATTGTCATAATTTGAGATATTTGTGTTCATTGTCCGTGGCCAGCAGCTTGAGGAAACTGAAAGTCCTCTTTGTAAGAAAATGTCAAATAATGGAGAAGATTTTTAGCACAGAAGAAGGAAATAGCGCAGACAAGGTCTGCGTCTTTCCTAAGTTGGAGGAAATCCACCTCGACTGCATGCCTAAGTTAAGTGCTGAAGTGAGTGCTGAAGTGCATGTTTGA 3231 0.3736 MDAVSSALLEPVTNSVLDLLKKQVDYIRYRRNFDELDECVKQLKHKKEIVDHQCEEAVKNGHEIEGKVREWLGKVGKFETEVEKYWNDDGHKKTRFSNYLFPYFRHRLGRLAKKMAVEGKKITDDCPKSDEIAYRVYVTSNDAILSNNDLMDFGSRKSIMEQIMATLVEDPTVKMIGVYGRSGVGKSTLIKAIAKIARDKKLFNVVAFSEITDNPNLKQVQEDIAYPLGLKLEGEGENVRADNLRRRLKKEKENTLIILDDLWDRLDLNRLGIPLDGDVDDNDLSKKTNSDNQGPQGPTKEKSLGDYKGCKILLTSRKQNVLTDKMEVKLTFCVEELDEKDALKLFRKEAGIHGEMSKSKQEIVKKYCAGLPMAIVTVGRALRDKSDSEWEKLKNQDLVGVQNPMEISVKMSYDHLENEELKSIFFLCAQMGHQPLIMDLVKYCFGLGILEGVYWLGEARDRISTSIKKLKDSGLVLDGSSSIHFNVHDLVRDAALSIAQNEQNVFTLRNGKLNDWPELKRCTSISICNSDIIDELPNVMNCPQLKFFQIDNDDPSLKIPESFFKRMKKLRVLILTGFHLSSLPSSIKCLSDLRLLCLERCTLDDNLSIIGKLKKLRILSFSGSRIENLPAELKDLDKLQLLDISNCSIVTMIPPNLISRLTSLEELYVRKCFMEVSEEGERNQSQNSFISELKHLHQLQVVDLSIPCAEFFAKELFFDNLSDYKIEIGNFKTLSAGDFRMPNKYENFKSLALELKDDTDNIHSQTGIKLLFETVENLLLGELNGVQDVINELNLNGFPHLKHFSIVNNPSIKYIINSKDLFYPQDVFPKLESLCLYELKEIEMIYFSSGTEMICFSPFTDCSFTKLKTIKVEKCDQLKNLFSFCMVKLLVSLETIGVSDCGSLEEIIKIPDNSNKIEFLKLMSLSLESLSSFTSFYTTVEGSSTNRDQIQITVMTPPLFGELVEIPNLENLSLISMNKIQKIWSDQPPSNFCFQNLIKLAVNDCHNLRYLCSLSVASSLRKLKVLFVRKCQIMEKIFSTEEGNSADKVCVFPKLEEIHLDCMPKLSAEVSAEVHV* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0566 1076 PRINTS Disease resistance protein signature 175 190 - -
Gso7g0566 1076 PRINTS Disease resistance protein signature 249 263 - -
Gso7g0566 1076 PRINTS Disease resistance protein signature 368 382 - -
Gso7g0566 1076 PRINTS Disease resistance protein signature 634 650 - -
Gso7g0566 1076 PANTHER - 27 1050 - -
Gso7g0566 1076 PANTHER RPP4C3 27 1050 - -
Gso7g0566 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 428 IPR027417 -
Gso7g0566 1076 Gene3D Ribonuclease Inhibitor 486 683 IPR032675 -
Gso7g0566 1076 Gene3D - 336 417 IPR042197 -
Gso7g0566 1076 SUPERFAMILY L domain-like 487 1038 - -
Gso7g0566 1076 MobiDBLite consensus disorder prediction 279 303 - -
Gso7g0566 1076 Gene3D - 140 331 IPR027417 -
Gso7g0566 1076 SMART AAA_5 172 342 IPR003593 -
Gso7g0566 1076 Pfam NB-ARC domain 157 276 IPR002182 GO:0043531
Gso7g0566 1076 Pfam NB-ARC domain 308 396 IPR002182 GO:0043531
Gso7g0566 1076 Gene3D Ribonuclease Inhibitor 920 1074 IPR032675 -
Gso7g0566 1076 Gene3D Ribonuclease Inhibitor 684 919 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0566 Gso-Chr7 5841251 5856776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0566 510 741 Receptor kinase-like Gene Family AT4G28490 29.536 9.83e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0566 - - gsj:114418382 2094.7