Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0557 ATGGCGTGTTTGTTGAGAGCGAGAAACCCCTGTTACTCTCTGATGAGGCGCATTCGAATCCGGTGCATGAGCAACGTTCCCGAGAACACGGTGTATTCGGGGCCCACCTCGCAGAGCTCGACCAAGCGCGTCACGCTGAGCCAGTTGCGCCAGAAGCACCGCGCCTCCCAGCCCATCACCATGGTCACCGCCTACGACTACCCCGCCGCGGTGCACCTCGACACCGCCGGCGTCGACATCTGTCTCGTCGGCGACTCTGCGGCGATGGTGGTCCACGGCCATGACACCACTCTCCCCATCACGCTCGAGGAGATGCTCGTCCACTGCCGCGCCGTGGCGCGTGGAGCCAAGACGCCGCTTCTCGTTGGGGACTTGGCTTTTGGGACCTACGAGTCCAGCTCCAATCAGGCGGTGGATACTGCGGTTCGTATGTTGAAAGAAGGGGGAATGGATGCCATAAAACTGGAGGGAGGGTCGCCTTCGAGAATTGTTGCAGCAAAGGCTATTGTTGAGGCTGGAATTGCTGTCATGGGCCATGTAGGCCTTACTCCCCAGGCCATTAGTGTTTTAGGGGGGTTTAGACCTCAAGGAAAGAATGTTGCTAGTGCTGTCAAGGTTGTAGAGACAGCGTTGGCTTTACAAGAAGCAGGGTGCTTTTCCGTTGTTCTAGAGTGTGTGCCTGCACCGGTTGCGGCTGCAACCACGGCAACCCTTCAAATTCCTACAATTGGAATTGGGGCTGGACCCTTTTGCAGTGGACAAGTGCTAGTTTACCATGATCTGCTTGGTATGCTACAACACCCTCACCATGCAAAGGTTACTCCAAAATTTTGTAAGCAGTATGCACGTGTAGGAGATGTCATCAATAAAGCCTTACTGGAGTATAAGGAAGACGTGATAAATGGTTCATTTCCTGATGCTCACCATAGTCCATACAAAATCAGCAAAACAGATGCAGATGTTTTCTCAACTGAGTTGCAAAGGTTAGGTCTAGACAAGGCAGCATCTGCAGCATCTGAAGCAGTTCAGAAGATGGATACAACCAAATCAACTAGTGAAGGGAAACAAACAAAATAA 1077 0.5255 MACLLRARNPCYSLMRRIRIRCMSNVPENTVYSGPTSQSSTKRVTLSQLRQKHRASQPITMVTAYDYPAAVHLDTAGVDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKTPLLVGDLAFGTYESSSNQAVDTAVRMLKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVASAVKVVETALALQEAGCFSVVLECVPAPVAAATTATLQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVINGSFPDAHHSPYKISKTDADVFSTELQRLGLDKAASAASEAVQKMDTTKSTSEGKQTK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0557 358 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 43 309 IPR015813 GO:0003824
Gso7g0557 358 MobiDBLite consensus disorder prediction 341 358 - -
Gso7g0557 358 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 44 311 IPR003700 GO:0003864|GO:0015940
Gso7g0557 358 MobiDBLite consensus disorder prediction 338 358 - -
Gso7g0557 358 CDD KPHMT-like 46 305 IPR003700 GO:0003864|GO:0015940
Gso7g0557 358 Gene3D - 41 323 IPR040442 -
Gso7g0557 358 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 13 350 IPR003700 GO:0003864|GO:0015940
Gso7g0557 358 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 13 350 - -
Gso7g0557 358 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 43 310 IPR003700 GO:0003864|GO:0015940
Gso7g0557 358 Pfam Ketopantoate hydroxymethyltransferase 43 306 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0557 Gso-Chr7 5690413 5693156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0557 K00606 - gmx:100808841 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0557 7 5690413 5693156 Gso7g0557 7 5690413 5693156 ECH