Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0530 ATGGAGTTTGGATTTTTGGGTTTGGGGATAATGGGTAAGGCTATGGCAATCAATCTGCTACGCCATGGCTTCAAGGTCACTATTTGGAACAGAACCCTCTCCAAGTGTGATGAACTCGTGCAACATGGTGCTTCAGTTGGAGAAACCCCAGCAACTGTAGTCAAGAAATGCAAGTATACCATTGCAATGTTATCTGATCCTTCGGCTGCTTTATCGGTTGTGTTTGATAAAGATGGTGTTCTTGAGCATATTAATGGAAAATGTTATATTGACATGTCAACAGTTGATGCTGATACATCTTCCAAAATATCTGAGGCTATCAAAGCAAAAGGTGGTTACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCAGCAGAAGATGGCCAACTCATAATACTTGCTGCTGGAGATAAGGCATTGTATGATGAAGTGCTTCCAGCATTTGATGTACTGGGGAAGAAGTCTTTCTTTCTGGGTGAGGTTGGAAATGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGAATCACACTAGCTGAAAGAAGTGGTTTGAACCCTGGAACTCTTCTCGATGTGCTGGATCTTGGTGCCATAAGTAACGGCATGTTTAAATTGAAAGGACCTACAATGCTCCAAAACAGTTATTCCCCAGCTTTTCCGCTGAAACACCAGCAGAAGGACATGAGATTAGCTCTTGCCCTTGGAGATGAAAATGCTGTATCAATGCCAGTAGCAGCTGCTGCAAATGAGGCTTTCAAGAAAGCCAGAAGCATGGGGTTGGGAGACCTTGATTTTTCAGCAGTTCATGAGACTTTGAAAGCTCCTGATCATTCATCTTGA 873 0.4273 MEFGFLGLGIMGKAMAINLLRHGFKVTIWNRTLSKCDELVQHGASVGETPATVVKKCKYTIAMLSDPSAALSVVFDKDGVLEHINGKCYIDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGITLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKAPDHSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0530 290 PIRSF HIBADH 1 290 IPR015815 GO:0016491
Gso7g0530 290 Gene3D - 163 285 IPR013328 GO:0016491
Gso7g0530 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
Gso7g0530 290 Gene3D - 1 162 - -
Gso7g0530 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 284 IPR008927 -
Gso7g0530 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Gso7g0530 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Gso7g0530 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 283 - -
Gso7g0530 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0530 Gso-Chr7 5378581 5385365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0530 K18121 - gmx:100817216 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0530 7 5378581 5385365 Gso16g0235 16 2737339 2743377 GST