Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0529 ATGCTTTTGAGTTTACCATCACCATCACCACTGGTTTCCACCATGTCAGAGAAGAAGAAGAAGAAGAATAGCACGAGAAGGAGCGTTGTTGTTGTTGGGGAGAGCAAAAAGCCACAACCTTTGGTGGAAGTGGAAGACATAGAGGACTCACTTTCCTTCTCCAAAGACGAGACTCACAAACTGAGAGTGGCTCTTTTGGACTGGTACGACCTCAACCGAAGGGACCTTCCTTGGAGAACCACATTCAAACAAGAAGATGAAGAAGTGGAAAGAAGAGCTTATGGGGTGTGGGTCTCGGAGGTTATGCTGCAGCAAACAAGGGTTCAGACTGTTATTGCCTATTACAACCGTTGGATGCAAAAATGGCCCACCATTCACCATCTTGCGCAAGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTACCGAAGAGCTCGTTTTCTTTTAGAGGGGGCAAAGAAAATTGTTGCCGAAGGAGGCCAAATTCCTAAAGTGGCTTCTATGCTACGAAACATTCCTGGAATTGGAGAGTACACTTCTGGAGCCATTGCTTCTATTGCATTCAAAGAGGTTGTACCTGTTGTTGACGGAAATGTGGTAAGGGTGATTGCTAGACTGAGGGCTATTTCTGCAAATCCAAAAGACTCAGCCACTATTAAGAAATTTTGGAAATTAGCAGCTCAGTTGGTTGATCCTGTTCGTCCTGGGGACTTCAATCAGGCTCTCATGGAACTTGGGGCAACTGTATGCACCCCTTTGAACCCAAGCTGTTCCTCATGTCCAGCATCAGAATTTTGTCACGCGCTATCAAATGCTAAACATGATAGTACAGTAGCAGTTACAGATTATCCTGTTAAGGGTGTGAAGGTTAAACAAAGATGTGATTTTTCTGCTGTATGTGTTGTTGAGTTAGTTGGAGCTGAAACGTTAAATAAAAACCAGTCTAGCAGCAAGTTTATTCTTGTCAAAAGGCCTGAAGAAGGATTGCTTGCCGGTCTCTGGGAGTTTCCATCTGTCTTACTGGATGGAGAAGCAGTTCCATTAGCTAGAAGAGAAGCAATGGATCGCTTCTTGGAAAAAAATCTCAAAATTGACATCAGAAAGACTTGCAATATAGTTTTGAGGGAAGATATTGGGGAATTTGTTCACATTTTCAGTCACATCCGCCTCAAGTTGTATGTTGAATTGCTAGTGTTACAATTGAAAGGAGTAGATGATTTGTTCAAAAGCCCAGACAATAAAACAACTTGGAAGTGTGTTTACAGCAATGCGCTTTCTAGTATGGGACTGACAACCAGTGTAAGAAAGGTGTACAACATGGTTCAAAACTTCAAGCAGAAAACTCTTCCTTCTAGCCATGTGCCAACCAAAAAGAGAACTAGAACGACCACAAGAAACTAA 1413 0.4289 MLLSLPSPSPLVSTMSEKKKKKNSTRRSVVVVGESKKPQPLVEVEDIEDSLSFSKDETHKLRVALLDWYDLNRRDLPWRTTFKQEDEEVERRAYGVWVSEVMLQQTRVQTVIAYYNRWMQKWPTIHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKIVAEGGQIPKVASMLRNIPGIGEYTSGAIASIAFKEVVPVVDGNVVRVIARLRAISANPKDSATIKKFWKLAAQLVDPVRPGDFNQALMELGATVCTPLNPSCSSCPASEFCHALSNAKHDSTVAVTDYPVKGVKVKQRCDFSAVCVVELVGAETLNKNQSSSKFILVKRPEEGLLAGLWEFPSVLLDGEAVPLARREAMDRFLEKNLKIDIRKTCNIVLREDIGEFVHIFSHIRLKLYVELLVLQLKGVDDLFKSPDNKTTWKCVYSNALSSMGLTTSVRKVYNMVQNFKQKTLPSSHVPTKKRTRTTTRN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0529 470 MobiDBLite consensus disorder prediction 1 30 - -
Gso7g0529 470 CDD DNA_Glycosylase_C 302 445 IPR029119 -
Gso7g0529 470 Pfam NUDIX domain 321 442 IPR029119 -
Gso7g0529 470 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 293 452 - -
Gso7g0529 470 Gene3D - 60 272 IPR023170 -
Gso7g0529 470 SUPERFAMILY Nudix 288 445 IPR015797 -
Gso7g0529 470 CDD ENDO3c 94 250 IPR003265 GO:0006284
Gso7g0529 470 Gene3D Hypothetical protein; domain 2 75 197 - -
Gso7g0529 470 SMART endo3end 102 252 IPR003265 GO:0006284
Gso7g0529 470 PANTHER ADENINE DNA GLYCOSYLASE 20 464 IPR044298 GO:0006284|GO:0016798
Gso7g0529 470 SUPERFAMILY DNA-glycosylase 61 275 IPR011257 GO:0003824|GO:0006281
Gso7g0529 470 Pfam HhH-GPD superfamily base excision DNA repair protein 98 231 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0529 Gso-Chr7 5372014 5376086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0529 K03575 - gmx:100818278 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0529 7 5372014 5376086 Gso16g0234 16 2735927 2737029 GST